Sh_002I17_t000070

Overview
NameSh_002I17_t000070
Unique NameSh_002I17_t000070
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length189
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteConserved hypothetical protein
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_002I17contigSh_002I17:40333..40521
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_002I17_g000070Sh_002I17_g000070R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_002I17_p000070Sh_002I17_p000070R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_002I17_t000070 ID=Sh_002I17_t000070|Name=Sh_002I17_t000070|organism=R570 Sugarcane cultivar|type=mRNA|length=189bp
ATGACCGGAAAGACCACGAGGAACAGGGGGGCGGGGATTGACTGCACAAG
AAGTGTGAGTAGGGAGCAGAGAGCCATAAACAGAAGGAACAAACTTGAGT
CATCACTGGTTTTAAGGCGGAGTTATGTCCCTAGTGGTAACAAGAGAGCC
TTGAACCGTGCCATAAAATGGATGCTAGAACGTGAGTAG
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protein sequence of Sh_002I17_p000070

>Sh_002I17_p000070 ID=Sh_002I17_p000070|Name=Sh_002I17_p000070|organism=R570 Sugarcane cultivar|type=polypeptide|length=63bp
MTGKTTRNRGAGIDCTRSVSREQRAINRRNKLESSLVLRRSYVPSGNKRA
LNRAIKWMLERE*
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mRNA from alignment at Sh_002I17:40333..40521-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_002I17_t000070 ID=Sh_002I17_t000070|Name=Sh_002I17_t000070|organism=R570 Sugarcane cultivar|type=mRNA|length=189bp|location=Sequence derived from alignment at Sh_002I17:40333..40521- (R570 Sugarcane cultivar)
ATGACCGGAAAGACCACGAGGAACAGGGGGGCGGGGATTGACTGCACAAG AAGTGTGAGTAGGGAGCAGAGAGCCATAAACAGAAGGAACAAACTTGAGT CATCACTGGTTTTAAGGCGGAGTTATGTCCCTAGTGGTAACAAGAGAGCC TTGAACCGTGCCATAAAATGGATGCTAGAACGTGAGTAG
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Coding sequence (CDS) from alignment at Sh_002I17:40333..40521-

>Sh_002I17_t000070 ID=Sh_002I17_t000070|Name=Sh_002I17_t000070|organism=R570 Sugarcane cultivar|type=CDS|length=189bp|location=Sequence derived from alignment at Sh_002I17:40333..40521- (R570 Sugarcane cultivar)
ATGACCGGAAAGACCACGAGGAACAGGGGGGCGGGGATTGACTGCACAAG
AAGTGTGAGTAGGGAGCAGAGAGCCATAAACAGAAGGAACAAACTTGAGT
CATCACTGGTTTTAAGGCGGAGTTATGTCCCTAGTGGTAACAAGAGAGCC
TTGAACCGTGCCATAAAATGGATGCTAGAACGTGAGTAG
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