Overview
Name | Sh_001B06_p000060 |
---|---|
Unique Name | Sh_001B06_p000060 |
Type | polypeptide |
Organism | R570 Sugarcane cultivar (R570 (sugarcane cultivar)) |
Sequence length | 1618 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
---|---|---|
Sh_001B06 | contig | Sh_001B06:34635..39488 |
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis Name | Date Performed |
---|---|
Structural and functional annotation of S. officinarum | 2017-07-25 |
Cross References
External references for this polypeptide
Database | Accession |
---|---|
InterPro | IPR001878 |
InterPro | IPR025724 |
InterPro | IPR012337 |
InterPro | IPR013103 |
InterPro | IPR001584 |
InterPro | IPR025314 |
InterPro | IPR000095 |
Relationships
This polypeptide derives from the following mRNA feature(s):
Feature Name | Unique Name | Species | Type |
---|---|---|---|
Sh_001B06_t000060 | Sh_001B06_t000060 | R570 Sugarcane cultivar | mRNA |
Sequences
The following sequences are available for this feature:
polypeptide sequence
>Sh_001B06_p000060 ID=Sh_001B06_p000060|Name=Sh_001B06_p000060|organism=R570 Sugarcane cultivar|type=polypeptide|length=1618bpback to top
MSAGQSQGSVASSARRRQEADLAAAEKRERAAADAAAAAARASRLAAAEL
AAARAEVEAAAAADAARAAAAEVEVLRGSNSSSIAADDSADADLELLERE
ASRGRAAQWAAVHAHERGGSPDRRRHAGGAPEGGAHGGGAPGGGAHGGGG
RVDGERGLHRQRGSLSPVRYRGHHEYQAVVRDVGLGGGWPTLTKTNYVEW
AAVMRVKLQVRHMWDAVRYGDVDYDQDRRALDALIAAVPPEMQFSLTSKR
TAKEAWDAIAAARIGSDRARKSTLQALRKEWENLAFKPGEDVDDFALRLN
TLLQKLVQFGDDTYGEERAVEKLFRCVPEKYKQMARSIESLLDLSTMTIE
EALGRLKVVDSDEPQRLSGPVTIGGKLLLTREQWAAGQGDRKKGESSSTT
GGRKRGKRGKPRKDAQAGARGRAEGDDRGGAQGGAAGKQKPARGDPCYNC
GKLGHWAKDCRQPRRGQAHVAQAEEEEQPALFIAHASIELPPAAPAATAL
LHLDEPKAHALLDDSSGNDKADGWCLDTGATHHMTGRREFFTELDPSVRG
TVKFGDASAVEIKGVGSVVFVAKTGEHRLLTGVYYIPALRNSIISLGQLD
ESGSRVEIEHGVLRIWDHRHRLLVKVNRSNRLYVLHAQVAQPLCLAARRD
DDAWRWHERFGHLNFEALRQLGSKDMVRGMPHVDHVEQFCDTCVLTKLRR
LPFPRQASFRAKEKLELVHGDLCGPVTPATPGGRRYFLLLVDDMSRYMWA
VLLDAKAAAADAIKRLQAAAEAECGRKLRVLRTDNGGEFTAAEFAAYCAD
EGIHRHFSAPYTPQQNGVVERRNQTVVATARALLKQRGMPAIYWGEAVMT
AVHLLNRSPTKALDDKTPYEAWHGRKPAVSHLRVFGCLAFVKELNHVGKL
DDRSTPGVFIGYAEGSKAYRVLDPATRRVRITRDVVFDEGRSWTWGKMVD
DGSTPTTSDFVVDYVHFKEAGGASSSSSPSSPTPPPCSPPPPASPSPPPP
PAPASPQAPASPPPAPPATPRSPTLDPTSSGSAPAASAHDEQRTVEFATP
LSNDEDRIDAYHGGEPLRYRTVDNLLGEQPVPGLAQHDFEAELHLVQDDG
EPRSFAEAERDAAWRAAMQMEMDAVERNKTWELADLPAGHHAISLKWVFK
LKKDETGEVIKHKARLVARGFVQQEGIDFDDAFAPVARMESVRLLLALAA
QEGWRVHHMDVKSAFLNGDLKEEVYVHQPPGFVIPGKEGKVLRLRKALYG
LRQAPRAWNAKLDSTLKGMGFEQSPHEAAIYRRGSGGKALLVGVYVDDLV
ITGTKEVEIEAFKEKMRATFQMSDLGPLSFYLGIEVHQDSSGTSLRQTAY
AKRIVELGGLTDCNPAHTPMEERLRLSRESTEEEVDATQYRRIVGSLRYL
VHTRPDLAFAVGYVSRFMQRPTMEHQQAVKRILRYVAGTSDYGLHYPRCP
GAAHFIGYSDSDHAGDIDTSKSTSGTLFFLGKCPISWQSVKQQVVALSSC
EAEYIAATTAATQALWLARLLGDLLGRDAEAVELRVDSKSALALAKNPVF
HERSKHIRVRYHFIRSCLEEGSVRANYINTQDQLADFLTKSLGRVKFQEL
RARIGMAQIPHKEPHKT*
Annotated Terms
The following terms have been associated with this polypeptide:
Term | Definition |
---|---|
GO:0003676 | nucleic acid binding |
GO:0008270 | zinc ion binding |
Term | Definition |
---|---|
GO:0015074 | DNA integration |