Sh_001C11_g000050

Overview
NameSh_001C11_g000050
Unique NameSh_001C11_g000050
Typegene
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length4652
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_001C11contigSh_001C11:70385..75036
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteProtein DETOXIFICATION
TypemRNA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
Sh_001C11_t000050Sh_001C11_t000050R570 Sugarcane cultivarmRNA


Sequences
The following sequences are available for this feature:

gene sequence

>Sh_001C11_g000050 ID=Sh_001C11_g000050|Name=Sh_001C11_g000050|organism=R570 Sugarcane cultivar|type=gene|length=4652bp
ATGGGCACGGCGAGCGATCAGCAGAACACGCCGCTCCTGTCGGCAGATGG
CGGCAGCGGCGGCGAAGGCGTGGTGGCGCTGCCGGGCGAAGCTGGCGGCA
GCGGGCACGGGGTGAGCGCGCAGCTGGAGCGTATCCTCGCCGACGAGTCG
GCGCCCCGTGCACAGCGGCTGGCGCGCGCGGCGCGGGTGGAGCTCCGCCT
GCTGGTGGCACTGGCCGCGCCGGCCGTGGCCGTCTACATGATCAACTACT
CCATGTCCCTGTCTACCAGGATCTTCTGCGGGCAGCTCGGCACTCTGGAG
CTCGCCGCCGCCTCGCTCGGCAACGTCGGTATCCAGGTCTTCGCATACGG
CCTCATGGTAACGTTAACGTGCCTTTGATTTCTTCATCGCTGCCAACAGA
TGTGTGTTTTGTTCTTGCTACTGAACATTTGGTAGTTGCATTGCAGCTGG
GCATGGGCAGCGCGGTGGAGACGCTGTGCGGGCAGGCGTACGGCGCGCAC
AAGTACGACATGCTGGGCATCTACATGCAGCGCTCCTTCGTCCTGCTCAC
CGCCACCGGCGTCCCGCTCGCCGTCATCTACGTGTTCTCGAAGCAGATCC
TGCTGCTGCTGGGGGAGTCGGAGCGGATCGCCTCGGCGGCCTGGGTGTTC
GTGCTCGGCCTCATCCCGCAGATCTTCGCCTACGCCTTCAACTTCCCCAT
CCAGAAGTTCCTGCAGGCGCAGAGCATCGTGGCGCCCACGCGCCTACATC
TCTGTGGCGACGCTGGCCGCGCACCTGCTCCTCAGCTGGTTCGCCGTCTA
CAGGCTGGGGCTGGGCCTGCTGGGCGCGTCGCTGATCCTCAGCCTCAGCT
GGTGGGTCATCGTCGCCGCGCAGTTCGTGTACATCGTCAGGTCCCAGAGG
TGCCGCCGGACGTGGACGGGCTTCTCCTGCAGGGCGTTCTCTGGCTTGCC
GGAGTTCCTCAAGCTCTCGTTCGCGTCGGCGGTCATGCTTTGCCTCGAGA
CGTGGTACACGCAGATCACCGTGCTCATAGCGGGCTTGCTCAAGGACCCG
GAGATCGCCCTTGATTCTCTTGCTGTCTGGTATGTTCTGTTAATAGTTAA
TTAATTACTGACAATTGTTTCTTGGATGGACACGTGTTAATGCCTTTAAT
TGTTCCCCATTCACATGCTATACTATCGACTCGATCAGCATGTCCATATC
AGGATGGGTGTTCATGGTGTCGGTAGGCTTCAACGCTGCTGCTAGGTACC
TCTAACTTTGTGTATACCACACTGCTGCTCACACAGCACTCAATTAGATC
AACAAAATCAACACGTGCTAGCTGTATATATGTATATATCATGAGTGCGA
ACGTATACGACGACGACGTTGCAGCGTGAGGGTGAGCAACGAGCTCGGAG
CCGGGCACCCCATGGCGACATCTTTCTCTGTCAAGGTCGTGACAACGCTG
TCTTTGATGGTGGCGTCCATTATAGCAGTCATCGTTATGTGCCTCCGCGA
CTACATCAGCTACGTCTTCACCAGAGGGGATGACGTCGCGCGCGCCGTGT
CCACCATGACCCCGCTGCTCGCCGTCACCATCGTGCTCAATGGCATTCAG
CCCGTCCTATCTGGTATATACATTATATACTCCTACTCCTATATGTTTAG
TACTTCGTTTCTCAATTGAAAATCATTTTGGCTTTTCGGTACATAGCTAT
ATATGTATCTAGATATAAACTATGTCTTAATACATAGTAAAAACTACTCT
GTTTCATAATAGATGACGTTGTAGAATCTGTCATAGTTATCAATGTTGAA
AGGCAAAAGACTTTGAGAGGGGCATCATCAAGGAAGGGGTCATCGGCCGT
GTAAGGGCGGGCCACTACACTCACCTGGGGGCCGCCTCGGCACCTGGCGC
CCCCGTCTTGGTGTCATACCAATCCGCTTTGGTGTCGTCCTCTAGCCGCA
CTACTTGGACATCGCTAGCGGCTGGCCACCGAGAGGTGGCCTAGAATGGG
AGGAAAGTGGATCCTACCGCCCTTGTGTTGGGGAGAAATCACGATGGAGG
GTGCGAGTGTTGTGTGCGAGGCAATCGCAATGGAAGGGATAAGGCTCCTC
CCACCACAAGAACTTTTTCCTTTTTTATTCACCTTAGGCCACAGGATAAA
CAACAACAAGATGGGTAGACTGATGGTATGGTTGGGTGGAACTTGCATGT
TAGGCTATAGTGTTAAGTATTTTGGTACAAAATTTGAATGCTAAAGTCAG
TATTGTGAGACGGAGGCCAGAGGAGTATGAATCTTGAAAACCAAAAAAGA
ATTATAATCTGGAACAAAGAAAGTAGTAGGGGAGCAGGCGCCAACTTCGA
GAGGGACGTCATCAGGGAAGGTGTCATCAGCCATGGAAGGGCAAGCCACT
ACCCTCATCTGGTGCCGCCTCAGCGCACCTGACGCCCTGTTTTGGTGTCG
GACCGATCCGCTTGGTGTCGTCCTCTAGCCGCACCACCTGGACATCTCTA
GCAGGTGGCTGCTGAGAGGGTGGCATAGAATGGGAGGGAAGCAGATCCCA
CCGCCCTTGCATTGGGGAGAAACAATGATGGAGGGTGCGAGCATAGTGTG
CGAGACAATCACAATGGAAGGTATAAGGCTCCTCCCACCAGCCACCACAA
GAACTTTTTCCCTTTTTATTCACCTTATGCCACTGGATGGCAACAACAAC
AAGACGGATGGACTGATGGTATGATTGGGTGGAACCTGCATGTTAGGCCA
GAAATACGAAACCATAGCGGGGTGGGCGCCCTCTCTGTATCTCTCAACGT
CTATTTCACATTAAGATTCGTGCTGGAGTGCTCCAAAATCCGTGCCCAAG
TGTTTTTTTTACCTGCACGAATCACGGAACAAACTGAACCACCCCAGTGT
GGAAATTGCAAGTTGCATGTTAGGCTTAGTGTTAAGTATTCTATAGTGTT
AAGTATTGTCATATACGAAATCTGAATGCAGTATTATAAGACAGAGGCCA
GAGGGAGTAGAAATCTAGAAAAAACAAAATAAATTATAATTGGAACGAAG
AAAGTTGTAACTTCATTTGCTCCATATATGGTGGCGTGTCAATCATTTTC
AGATTACTATATAGGACCATACGTCAATCATTTTCAGATTCCCATGGTGG
CGTGTTCTTTAGCAGCTAGTACTTAGCGTTGCCTGGGTTTGTCTTACTAG
CTTTAATCGACTGGTGGCTTGAGTAGTGGTTGAAATGATGACACTGATCT
TTTATCTATTTCTTCCTTTGCAGGTGTGGCGGTTGGCTGCGGGTGGCAGG
CGTTCGTGGCATATGTGAACATCGCTTGCTACTACGGCATTGGGATTCCT
CTTGGCTGCGTTTTGGGATTCTACTTTGATCTAGGTGCCATGGTAAAGTT
GTAGATTAATTTCCTATTAGAAAATCCCACTCTTTCAGTTATATATATAT
ATATATATATATATATATATATATATAGTTCGAGGAGATAACGGCAACCC
ACATGTGTACATGCATGCAGGGAATATGGGGTGGAATGATAGGTGGATTG
ATTGTTCAGACGCTTATTCTTACCTGGGTCACACTTCGCACTGATTGGAA
TAAAGAGGTTTGCAACGTTTTCACAACCTTATGCATCTACTTTTAAAAGG
ACACACATAGAACATATTCTTTACACCCTTTTATTCTGAATATAAGCCTT
TTGATACATTAGCCACATAACCGGGCGATTTCAGTATGAAACTAGCTTTG
ACTTGCAACTTTTTTGGAATATTTATAGCATTGAGAAGTTTTTCCACGAT
GAAGAATCTAGTACCATCAATCATGTGTTGCCAATTAATCTATATGGTCT
TCATACATATATTAATGGGTCAAGTCAAATAAGTTTGACCAACTAAAACT
CTGAATCAATCTTTATTTGGAATCAGATGGAGTATACATGTATGTTGCAA
TTTATGTATTTTATATGAGTTAAGTATATATATGTGTCATATTGTTATCA
CTTCATCAGTAACTTGGAAAAATATATATGCAAATGGAAGGTTCAGGAGT
ACAATAGTATTCTACACCAAACTGTTATAATGAACCAAAATTCAGTACTA
TTCAATAGTCACGTTTCAGTATTATTCAGTATTTCTTGGTATTGTGCATA
GTACTAACTGATAATGAACGATGTTCAGCAGTACTCAATATTTTTTTAGG
TCAGTTTTGCCTTGCGGTACCACTGCCGAGGTTCAGAGTACATATTTGGT
TCTATACATTTATTTTGCTGACAATATAATGATCTGGAATTATTTAGAGA
AAGAAACAATAAACTACTGTTAACTTTGCATATACATTTAACTTTGTACG
TATTGTATTACAGGTAGAACAAGCGCGCATGAGGCTAAATAAATGGGATG
ACAAAAAGAAGCACCTTTTGGCCGAAGATTGAAAAAGTTATATGGATTGT
GCACGCGGTCCACTATGCATGTTATGCATGGTACTGATGAAGATTGAAAA
ATAAGTAGTTAGCTTGTTTGGCACTGAAATGGTGAAACTGAAATTCGAAC
AAGAAGAGACTAATGGCTCTCTTGCGCGAAGTTCTTTTTTTTTCCTGAAT
TGTGTGTCATGACTCTCACGACAAAAAGAAAGCTACAACAGAGAATTGGC
TT
back to top

gene from alignment at Sh_001C11:70385..75036-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_001C11_g000050 ID=Sh_001C11_g000050|Name=Sh_001C11_g000050|organism=R570 Sugarcane cultivar|type=gene|length=4652bp|location=Sequence derived from alignment at Sh_001C11:70385..75036- (R570 Sugarcane cultivar)
ATGGGCACGGCGAGCGATCAGCAGAACACGCCGCTCCTGTCGGCAGATGG CGGCAGCGGCGGCGAAGGCGTGGTGGCGCTGCCGGGCGAAGCTGGCGGCA GCGGGCACGGGGTGAGCGCGCAGCTGGAGCGTATCCTCGCCGACGAGTCG GCGCCCCGTGCACAGCGGCTGGCGCGCGCGGCGCGGGTGGAGCTCCGCCT GCTGGTGGCACTGGCCGCGCCGGCCGTGGCCGTCTACATGATCAACTACT CCATGTCCCTGTCTACCAGGATCTTCTGCGGGCAGCTCGGCACTCTGGAG CTCGCCGCCGCCTCGCTCGGCAACGTCGGTATCCAGGTCTTCGCATACGG CCTCATGGTAACGTTAACGTGCCTTTGATTTCTTCATCGCTGCCAACAGA TGTGTGTTTTGTTCTTGCTACTGAACATTTGGTAGTTGCATTGCAGCTGG GCATGGGCAGCGCGGTGGAGACGCTGTGCGGGCAGGCGTACGGCGCGCAC AAGTACGACATGCTGGGCATCTACATGCAGCGCTCCTTCGTCCTGCTCAC CGCCACCGGCGTCCCGCTCGCCGTCATCTACGTGTTCTCGAAGCAGATCC TGCTGCTGCTGGGGGAGTCGGAGCGGATCGCCTCGGCGGCCTGGGTGTTC GTGCTCGGCCTCATCCCGCAGATCTTCGCCTACGCCTTCAACTTCCCCAT CCAGAAGTTCCTGCAGGCGCAGAGCATCGTGGCGCCCACGCGCCTACATC TCTGTGGCGACGCTGGCCGCGCACCTGCTCCTCAGCTGGTTCGCCGTCTA CAGGCTGGGGCTGGGCCTGCTGGGCGCGTCGCTGATCCTCAGCCTCAGCT GGTGGGTCATCGTCGCCGCGCAGTTCGTGTACATCGTCAGGTCCCAGAGG TGCCGCCGGACGTGGACGGGCTTCTCCTGCAGGGCGTTCTCTGGCTTGCC GGAGTTCCTCAAGCTCTCGTTCGCGTCGGCGGTCATGCTTTGCCTCGAGA CGTGGTACACGCAGATCACCGTGCTCATAGCGGGCTTGCTCAAGGACCCG GAGATCGCCCTTGATTCTCTTGCTGTCTGGTATGTTCTGTTAATAGTTAA TTAATTACTGACAATTGTTTCTTGGATGGACACGTGTTAATGCCTTTAAT TGTTCCCCATTCACATGCTATACTATCGACTCGATCAGCATGTCCATATC AGGATGGGTGTTCATGGTGTCGGTAGGCTTCAACGCTGCTGCTAGGTACC TCTAACTTTGTGTATACCACACTGCTGCTCACACAGCACTCAATTAGATC AACAAAATCAACACGTGCTAGCTGTATATATGTATATATCATGAGTGCGA ACGTATACGACGACGACGTTGCAGCGTGAGGGTGAGCAACGAGCTCGGAG CCGGGCACCCCATGGCGACATCTTTCTCTGTCAAGGTCGTGACAACGCTG TCTTTGATGGTGGCGTCCATTATAGCAGTCATCGTTATGTGCCTCCGCGA CTACATCAGCTACGTCTTCACCAGAGGGGATGACGTCGCGCGCGCCGTGT CCACCATGACCCCGCTGCTCGCCGTCACCATCGTGCTCAATGGCATTCAG CCCGTCCTATCTGGTATATACATTATATACTCCTACTCCTATATGTTTAG TACTTCGTTTCTCAATTGAAAATCATTTTGGCTTTTCGGTACATAGCTAT ATATGTATCTAGATATAAACTATGTCTTAATACATAGTAAAAACTACTCT GTTTCATAATAGATGACGTTGTAGAATCTGTCATAGTTATCAATGTTGAA AGGCAAAAGACTTTGAGAGGGGCATCATCAAGGAAGGGGTCATCGGCCGT GTAAGGGCGGGCCACTACACTCACCTGGGGGCCGCCTCGGCACCTGGCGC CCCCGTCTTGGTGTCATACCAATCCGCTTTGGTGTCGTCCTCTAGCCGCA CTACTTGGACATCGCTAGCGGCTGGCCACCGAGAGGTGGCCTAGAATGGG AGGAAAGTGGATCCTACCGCCCTTGTGTTGGGGAGAAATCACGATGGAGG GTGCGAGTGTTGTGTGCGAGGCAATCGCAATGGAAGGGATAAGGCTCCTC CCACCACAAGAACTTTTTCCTTTTTTATTCACCTTAGGCCACAGGATAAA CAACAACAAGATGGGTAGACTGATGGTATGGTTGGGTGGAACTTGCATGT TAGGCTATAGTGTTAAGTATTTTGGTACAAAATTTGAATGCTAAAGTCAG TATTGTGAGACGGAGGCCAGAGGAGTATGAATCTTGAAAACCAAAAAAGA ATTATAATCTGGAACAAAGAAAGTAGTAGGGGAGCAGGCGCCAACTTCGA GAGGGACGTCATCAGGGAAGGTGTCATCAGCCATGGAAGGGCAAGCCACT ACCCTCATCTGGTGCCGCCTCAGCGCACCTGACGCCCTGTTTTGGTGTCG GACCGATCCGCTTGGTGTCGTCCTCTAGCCGCACCACCTGGACATCTCTA GCAGGTGGCTGCTGAGAGGGTGGCATAGAATGGGAGGGAAGCAGATCCCA CCGCCCTTGCATTGGGGAGAAACAATGATGGAGGGTGCGAGCATAGTGTG CGAGACAATCACAATGGAAGGTATAAGGCTCCTCCCACCAGCCACCACAA GAACTTTTTCCCTTTTTATTCACCTTATGCCACTGGATGGCAACAACAAC AAGACGGATGGACTGATGGTATGATTGGGTGGAACCTGCATGTTAGGCCA GAAATACGAAACCATAGCGGGGTGGGCGCCCTCTCTGTATCTCTCAACGT CTATTTCACATTAAGATTCGTGCTGGAGTGCTCCAAAATCCGTGCCCAAG TGTTTTTTTTACCTGCACGAATCACGGAACAAACTGAACCACCCCAGTGT GGAAATTGCAAGTTGCATGTTAGGCTTAGTGTTAAGTATTCTATAGTGTT AAGTATTGTCATATACGAAATCTGAATGCAGTATTATAAGACAGAGGCCA GAGGGAGTAGAAATCTAGAAAAAACAAAATAAATTATAATTGGAACGAAG AAAGTTGTAACTTCATTTGCTCCATATATGGTGGCGTGTCAATCATTTTC AGATTACTATATAGGACCATACGTCAATCATTTTCAGATTCCCATGGTGG CGTGTTCTTTAGCAGCTAGTACTTAGCGTTGCCTGGGTTTGTCTTACTAG CTTTAATCGACTGGTGGCTTGAGTAGTGGTTGAAATGATGACACTGATCT TTTATCTATTTCTTCCTTTGCAGGTGTGGCGGTTGGCTGCGGGTGGCAGG CGTTCGTGGCATATGTGAACATCGCTTGCTACTACGGCATTGGGATTCCT CTTGGCTGCGTTTTGGGATTCTACTTTGATCTAGGTGCCATGGTAAAGTT GTAGATTAATTTCCTATTAGAAAATCCCACTCTTTCAGTTATATATATAT ATATATATATATATATATATATATATAGTTCGAGGAGATAACGGCAACCC ACATGTGTACATGCATGCAGGGAATATGGGGTGGAATGATAGGTGGATTG ATTGTTCAGACGCTTATTCTTACCTGGGTCACACTTCGCACTGATTGGAA TAAAGAGGTTTGCAACGTTTTCACAACCTTATGCATCTACTTTTAAAAGG ACACACATAGAACATATTCTTTACACCCTTTTATTCTGAATATAAGCCTT TTGATACATTAGCCACATAACCGGGCGATTTCAGTATGAAACTAGCTTTG ACTTGCAACTTTTTTGGAATATTTATAGCATTGAGAAGTTTTTCCACGAT GAAGAATCTAGTACCATCAATCATGTGTTGCCAATTAATCTATATGGTCT TCATACATATATTAATGGGTCAAGTCAAATAAGTTTGACCAACTAAAACT CTGAATCAATCTTTATTTGGAATCAGATGGAGTATACATGTATGTTGCAA TTTATGTATTTTATATGAGTTAAGTATATATATGTGTCATATTGTTATCA CTTCATCAGTAACTTGGAAAAATATATATGCAAATGGAAGGTTCAGGAGT ACAATAGTATTCTACACCAAACTGTTATAATGAACCAAAATTCAGTACTA TTCAATAGTCACGTTTCAGTATTATTCAGTATTTCTTGGTATTGTGCATA GTACTAACTGATAATGAACGATGTTCAGCAGTACTCAATATTTTTTTAGG TCAGTTTTGCCTTGCGGTACCACTGCCGAGGTTCAGAGTACATATTTGGT TCTATACATTTATTTTGCTGACAATATAATGATCTGGAATTATTTAGAGA AAGAAACAATAAACTACTGTTAACTTTGCATATACATTTAACTTTGTACG TATTGTATTACAGGTAGAACAAGCGCGCATGAGGCTAAATAAATGGGATG ACAAAAAGAAGCACCTTTTGGCCGAAGATTGAAAAAGTTATATGGATTGT GCACGCGGTCCACTATGCATGTTATGCATGGTACTGATGAAGATTGAAAA ATAAGTAGTTAGCTTGTTTGGCACTGAAATGGTGAAACTGAAATTCGAAC AAGAAGAGACTAATGGCTCTCTTGCGCGAAGTTCTTTTTTTTTCCTGAAT TGTGTGTCATGACTCTCACGACAAAAAGAAAGCTACAACAGAGAATTGGC TT
back to top