Sh_002I17_t000070

Overview
NameSh_002I17_t000070
Unique NameSh_002I17_t000070
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length189
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_002I17contigSh_002I17:40333..40521
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteConserved hypothetical protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_002I17_g000070Sh_002I17_g000070R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_002I17_p000070Sh_002I17_p000070R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_002I17_t000070 ID=Sh_002I17_t000070|Name=Sh_002I17_t000070|organism=R570 Sugarcane cultivar|type=mRNA|length=189bp
ATGACCGGAAAGACCACGAGGAACAGGGGGGCGGGGATTGACTGCACAAG
AAGTGTGAGTAGGGAGCAGAGAGCCATAAACAGAAGGAACAAACTTGAGT
CATCACTGGTTTTAAGGCGGAGTTATGTCCCTAGTGGTAACAAGAGAGCC
TTGAACCGTGCCATAAAATGGATGCTAGAACGTGAGTAG
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protein sequence of Sh_002I17_p000070

>Sh_002I17_p000070 ID=Sh_002I17_p000070|Name=Sh_002I17_p000070|organism=R570 Sugarcane cultivar|type=polypeptide|length=63bp
MTGKTTRNRGAGIDCTRSVSREQRAINRRNKLESSLVLRRSYVPSGNKRA
LNRAIKWMLERE*
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mRNA from alignment at Sh_002I17:40333..40521-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_002I17_t000070 ID=Sh_002I17_t000070|Name=Sh_002I17_t000070|organism=R570 Sugarcane cultivar|type=mRNA|length=189bp|location=Sequence derived from alignment at Sh_002I17:40333..40521- (R570 Sugarcane cultivar)
ATGACCGGAAAGACCACGAGGAACAGGGGGGCGGGGATTGACTGCACAAG AAGTGTGAGTAGGGAGCAGAGAGCCATAAACAGAAGGAACAAACTTGAGT CATCACTGGTTTTAAGGCGGAGTTATGTCCCTAGTGGTAACAAGAGAGCC TTGAACCGTGCCATAAAATGGATGCTAGAACGTGAGTAG
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Coding sequence (CDS) from alignment at Sh_002I17:40333..40521-

>Sh_002I17_t000070 ID=Sh_002I17_t000070|Name=Sh_002I17_t000070|organism=R570 Sugarcane cultivar|type=CDS|length=189bp|location=Sequence derived from alignment at Sh_002I17:40333..40521- (R570 Sugarcane cultivar)
ATGACCGGAAAGACCACGAGGAACAGGGGGGCGGGGATTGACTGCACAAG
AAGTGTGAGTAGGGAGCAGAGAGCCATAAACAGAAGGAACAAACTTGAGT
CATCACTGGTTTTAAGGCGGAGTTATGTCCCTAGTGGTAACAAGAGAGCC
TTGAACCGTGCCATAAAATGGATGCTAGAACGTGAGTAG
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