Sh_003M06_t000020

Overview
NameSh_003M06_t000020
Unique NameSh_003M06_t000020
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length225
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_003M06contigSh_003M06:3162..3524
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteDoubtful hypothetical protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_003M06_g000020Sh_003M06_g000020R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_003M06_p000020Sh_003M06_p000020R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_003M06_t000020 ID=Sh_003M06_t000020|Name=Sh_003M06_t000020|organism=R570 Sugarcane cultivar|type=mRNA|length=225bp
ATGCTGCTGCGCGTCAGCGCGTGCAGTTCCTTCGAACATTTTCTTCGTTC
GCTGGGTTTTGCTATGGTGGTGTGTGTGATGTTATTACCTAGTCTGGCGC
CGCCGGCAGGAGGGGCGGTGGATCAGGTGGGTGCCGGGGAGTGTGTGGCC
GCGAAGAAGGGATCAGCCCTCGGCGAGTCGAGGGAGAAGGAGGAGAGATC
CCTTACGAATTCTTCAGAGGACTGA
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protein sequence of Sh_003M06_p000020

>Sh_003M06_p000020 ID=Sh_003M06_p000020|Name=Sh_003M06_p000020|organism=R570 Sugarcane cultivar|type=polypeptide|length=75bp
MLLRVSACSSFEHFLRSLGFAMVVCVMLLPSLAPPAGGAVDQVGAGECVA
AKKGSALGESREKEERSLTNSSED*
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mRNA from alignment at Sh_003M06:3162..3524-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_003M06_t000020 ID=Sh_003M06_t000020|Name=Sh_003M06_t000020|organism=R570 Sugarcane cultivar|type=mRNA|length=363bp|location=Sequence derived from alignment at Sh_003M06:3162..3524- (R570 Sugarcane cultivar)
GTCGTTCCTGGAATGGATGGGTGGTCCAATGGATGTGTTTTTTACTCTGA TGCTGCCCTCGACGAATGCTGCTGCGCGTCAGCGCGTGCAGTTCCTTCGA ACATTTTCTTCGTTCGCTGGGTTTTGCTATGGTGGTGTGTGTGATGTTAT TACCTAGTCTGGCGCCGCCGGCAGGAGGGGCGGTGGATCAGGTGGGTGCC GGGGAGTGTGTGGCCGCGAAGAAGGGATCAGCCCTCGGCGAGTCGAGGGA GAAGGAGGAGAGATCCCTTACGAATTCTTCAGAGGACTGACGAGGCGGCG GCGGCGGCTGGGATCGTAGTCCTGGATTTCTCGCGCTGTGTGGATGAATT TCCCTGAATTACC
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Coding sequence (CDS) from alignment at Sh_003M06:3162..3524-

>Sh_003M06_t000020 ID=Sh_003M06_t000020|Name=Sh_003M06_t000020|organism=R570 Sugarcane cultivar|type=CDS|length=225bp|location=Sequence derived from alignment at Sh_003M06:3162..3524- (R570 Sugarcane cultivar)
ATGCTGCTGCGCGTCAGCGCGTGCAGTTCCTTCGAACATTTTCTTCGTTC
GCTGGGTTTTGCTATGGTGGTGTGTGTGATGTTATTACCTAGTCTGGCGC
CGCCGGCAGGAGGGGCGGTGGATCAGGTGGGTGCCGGGGAGTGTGTGGCC
GCGAAGAAGGGATCAGCCCTCGGCGAGTCGAGGGAGAAGGAGGAGAGATC
CCTTACGAATTCTTCAGAGGACTGA
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