Sh_004B11_t000010

Overview
NameSh_004B11_t000010
Unique NameSh_004B11_t000010
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length225
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004B11contigSh_004B11:32413..32637
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
Notesimilar to N-hydroxycinnamoyl benzoyltransferase-like protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_004B11_g000010Sh_004B11_g000010R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_004B11_p000010Sh_004B11_p000010R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_004B11_t000010 ID=Sh_004B11_t000010|Name=Sh_004B11_t000010|organism=R570 Sugarcane cultivar|type=mRNA|length=225bp
ATGTACGGCTGCGACTTCGGCTGGGGCGCGCCGCTGGCGGCGCGCAGCGG
CAAGGCCAACAAGTCCGACGGGAAGGCGTCGCTGTACCCGGGGCAGGAGG
GCGGCGGAAGCATCGCCGCAGAGCTGGTGCTGACGCCGGAGCACATGGCG
TTGCTGGAGCAGGACGACGAGTTCTGGGCGGCCGTTACGCCGGACAAGCC
TTGTCCGCCGGCGGGGAAGAATTGA
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protein sequence of Sh_004B11_p000010

>Sh_004B11_p000010 ID=Sh_004B11_p000010|Name=Sh_004B11_p000010|organism=R570 Sugarcane cultivar|type=polypeptide|length=75bp
MYGCDFGWGAPLAARSGKANKSDGKASLYPGQEGGGSIAAELVLTPEHMA
LLEQDDEFWAAVTPDKPCPPAGKN*
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mRNA from alignment at Sh_004B11:32413..32637-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004B11_t000010 ID=Sh_004B11_t000010|Name=Sh_004B11_t000010|organism=R570 Sugarcane cultivar|type=mRNA|length=225bp|location=Sequence derived from alignment at Sh_004B11:32413..32637- (R570 Sugarcane cultivar)
ATGTACGGCTGCGACTTCGGCTGGGGCGCGCCGCTGGCGGCGCGCAGCGG CAAGGCCAACAAGTCCGACGGGAAGGCGTCGCTGTACCCGGGGCAGGAGG GCGGCGGAAGCATCGCCGCAGAGCTGGTGCTGACGCCGGAGCACATGGCG TTGCTGGAGCAGGACGACGAGTTCTGGGCGGCCGTTACGCCGGACAAGCC TTGTCCGCCGGCGGGGAAGAATTGA
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Coding sequence (CDS) from alignment at Sh_004B11:32413..32637-

>Sh_004B11_t000010 ID=Sh_004B11_t000010|Name=Sh_004B11_t000010|organism=R570 Sugarcane cultivar|type=CDS|length=225bp|location=Sequence derived from alignment at Sh_004B11:32413..32637- (R570 Sugarcane cultivar)
ATGTACGGCTGCGACTTCGGCTGGGGCGCGCCGCTGGCGGCGCGCAGCGG
CAAGGCCAACAAGTCCGACGGGAAGGCGTCGCTGTACCCGGGGCAGGAGG
GCGGCGGAAGCATCGCCGCAGAGCTGGTGCTGACGCCGGAGCACATGGCG
TTGCTGGAGCAGGACGACGAGTTCTGGGCGGCCGTTACGCCGGACAAGCC
TTGTCCGCCGGCGGGGAAGAATTGA
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