Sh_004G10_t000010

Overview
NameSh_004G10_t000010
Unique NameSh_004G10_t000010
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length1488
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004G10contigSh_004G10:1710..3232
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteGTP binding protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_004G10_g000010Sh_004G10_g000010R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_004G10_p000010Sh_004G10_p000010R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_004G10_t000010 ID=Sh_004G10_t000010|Name=Sh_004G10_t000010|organism=R570 Sugarcane cultivar|type=mRNA|length=1488bp
ATGCGTAGTTCTCGAGAGGCTTGGCGTTCTTGCCTCGCACTGCACACCAA
CCGTTCGACGCAATGCCATAGCGGAGTTCTTGCCTTCCGTGGGCTTGCCT
CCACCATTTCGCCAGGTTATCCTTCCGAGTGGAAACTTTCTTGGGTCACC
AAGGTTCTGCCACGCCACGCCACTGCTGGCATGTCAGATCGTCTCACGGA
CGCCAGTGAAGTACTGAAGGTTCTCAAGTCCACCAGTGCTGACAACGCTG
ATCTCATCGATGCTCGTCGTCAGTTCGCGCGGTCCAACTGGCAGGTCGCC
CTGGCGTTCTTCAACTGGGCGGCGACCCTGCCGGGGTATGCCCACGGGTC
GAGGGCCTACACCAAGATGCTGGACATTCTTGGGCGGATGAAGAAGGTCA
GGCACATGAGGCAGCTGTTTGACGAGATTCCTGAGGAGCGGCGTGGGGAG
GTCGTGACGAATAAGATGTTCGCCGTGCTGTTGAACCGGTACGCGGGTGA
GCACAAGGTGCAGGAGGCGATAGAGGTGTTCTACCTGAGGAAGGATTACG
GGTTTGAGCTCGACTTGGTTGGGTTCCAGATACTCCTGATGTCGCTGTGC
CGTTATAAGCATGTCAAGGAGGCGGAGGCGTTGTTCCGTGAGAAGAAAGG
TGAGTTCCCGCATGTCACAAAGAGCTGGAACATTATACTAAATGGTTGGT
GTGTCAAGGGAAGCTGGAGAGACGCTCTAAGGATTTGGAATGATATCATT
GCATCCAAGGTTGAACGAGACCTGTTCACATATGGAACATTCATAAACGC
ACTGGCCAAAAATGGCAGAATTAGTGCAGCGGTGAAGCTGTTCAAAAGTA
TGTGGGAGAAAGGGATTAATCCTGATGTCGCGATTTGCAATTGTATCATT
GACCATCTGTGCTTCAAGAAACGAATTCCAGAAGCACTTGAGATTTTTGG
TGAGATGAATGACCGGGTTTGTCAAGCCGATGTGGCTACCTACAACACTT
TGATAAAATACTTATGTAAGATAAAAAGGATGGAAAAAGTTTATGAACTT
TTGGATGAAATGGAAGCAAAGGGCTGCTCTCCAAACAATAGGACATACTC
CTATATTCTGAAGACGACTGAGAAACCCAAAGATGTCATTGCTTTGATGC
AGAGGATGGAGCAAACCGGCTGTGAATTGGATTCTGATACATATAACTTA
ATATTGAACCTTTATATCAACTGGAAATATGAGAAGGGGGTGCAACAGGT
ATGGGATGAGATGGAGAGAAGAGGGTCAGGCCCAGATCAACGGTCATTTA
CTATTATGGTTCATGGTCTTCATTCCCAAGGCAAGCTCGATGAGGCTCTG
CAGTATTACACAACAATGAAGTCTAGAGGGATGATTCCAGAACCTAGGAC
CAAGATACTGGTGAAAGCTATGCATATGAAGAAAGACGGCGCTGCCACTG
AAGATGACTCAACAAGTATGGCAGGGAAGCATCTATAA
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protein sequence of Sh_004G10_p000010

>Sh_004G10_p000010 ID=Sh_004G10_p000010|Name=Sh_004G10_p000010|organism=R570 Sugarcane cultivar|type=polypeptide|length=496bp
MRSSREAWRSCLALHTNRSTQCHSGVLAFRGLASTISPGYPSEWKLSWVT
KVLPRHATAGMSDRLTDASEVLKVLKSTSADNADLIDARRQFARSNWQVA
LAFFNWAATLPGYAHGSRAYTKMLDILGRMKKVRHMRQLFDEIPEERRGE
VVTNKMFAVLLNRYAGEHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLC
RYKHVKEAEALFREKKGEFPHVTKSWNIILNGWCVKGSWRDALRIWNDII
ASKVERDLFTYGTFINALAKNGRISAAVKLFKSMWEKGINPDVAICNCII
DHLCFKKRIPEALEIFGEMNDRVCQADVATYNTLIKYLCKIKRMEKVYEL
LDEMEAKGCSPNNRTYSYILKTTEKPKDVIALMQRMEQTGCELDSDTYNL
ILNLYINWKYEKGVQQVWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEAL
QYYTTMKSRGMIPEPRTKILVKAMHMKKDGAATEDDSTSMAGKHL*
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mRNA from alignment at Sh_004G10:1710..3232+

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004G10_t000010 ID=Sh_004G10_t000010|Name=Sh_004G10_t000010|organism=R570 Sugarcane cultivar|type=mRNA|length=1523bp|location=Sequence derived from alignment at Sh_004G10:1710..3232+ (R570 Sugarcane cultivar)
ATGCGTAGTTCTCGAGAGGCTTGGCGTTCTTGCCTCGCACTGCACACCAA CCGTTCGACGCAATGCCATAGCGGAGTTCTTGCCTTCCGTGGGCTTGCCT CCACCATTTCGCCAGGTTATCCTTCCGAGTGGAAACTTTCTTGGGTCACC AAGGTTCTGCCACGCCACGCCACTGCTGGCATGTCAGATCGTCTCACGGA CGCCAGTGAAGTACTGAAGGTTCTCAAGTCCACCAGTGCTGACAACGCTG ATCTCATCGATGCTCGTCGTCAGTTCGCGGTCCACATGGATGAGGATATT ATCCTCACAGTCAGCGGTCCAACTGGCAGGTCGCCCTGGCGTTCTTCAAC TGGGCGGCGACCCTGCCGGGGTATGCCCACGGGTCGAGGGCCTACACCAA GATGCTGGACATTCTTGGGCGGATGAAGAAGGTCAGGCACATGAGGCAGC TGTTTGACGAGATTCCTGAGGAGCGGCGTGGGGAGGTCGTGACGAATAAG ATGTTCGCCGTGCTGTTGAACCGGTACGCGGGTGAGCACAAGGTGCAGGA GGCGATAGAGGTGTTCTACCTGAGGAAGGATTACGGGTTTGAGCTCGACT TGGTTGGGTTCCAGATACTCCTGATGTCGCTGTGCCGTTATAAGCATGTC AAGGAGGCGGAGGCGTTGTTCCGTGAGAAGAAAGGTGAGTTCCCGCATGT CACAAAGAGCTGGAACATTATACTAAATGGTTGGTGTGTCAAGGGAAGCT GGAGAGACGCTCTAAGGATTTGGAATGATATCATTGCATCCAAGGTTGAA CGAGACCTGTTCACATATGGAACATTCATAAACGCACTGGCCAAAAATGG CAGAATTAGTGCAGCGGTGAAGCTGTTCAAAAGTATGTGGGAGAAAGGGA TTAATCCTGATGTCGCGATTTGCAATTGTATCATTGACCATCTGTGCTTC AAGAAACGAATTCCAGAAGCACTTGAGATTTTTGGTGAGATGAATGACCG GGTTTGTCAAGCCGATGTGGCTACCTACAACACTTTGATAAAATACTTAT GTAAGATAAAAAGGATGGAAAAAGTTTATGAACTTTTGGATGAAATGGAA GCAAAGGGCTGCTCTCCAAACAATAGGACATACTCCTATATTCTGAAGAC GACTGAGAAACCCAAAGATGTCATTGCTTTGATGCAGAGGATGGAGCAAA CCGGCTGTGAATTGGATTCTGATACATATAACTTAATATTGAACCTTTAT ATCAACTGGAAATATGAGAAGGGGGTGCAACAGGTATGGGATGAGATGGA GAGAAGAGGGTCAGGCCCAGATCAACGGTCATTTACTATTATGGTTCATG GTCTTCATTCCCAAGGCAAGCTCGATGAGGCTCTGCAGTATTACACAACA ATGAAGTCTAGAGGGATGATTCCAGAACCTAGGACCAAGATACTGGTGAA AGCTATGCATATGAAGAAAGACGGCGCTGCCACTGAAGATGACTCAACAA GTATGGCAGGGAAGCATCTATAA
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Coding sequence (CDS) from alignment at Sh_004G10:1710..3232+

>Sh_004G10_t000010 ID=Sh_004G10_t000010|Name=Sh_004G10_t000010|organism=R570 Sugarcane cultivar|type=CDS|length=1488bp|location=Sequence derived from alignment at Sh_004G10:1710..3232+ (R570 Sugarcane cultivar)
ATGCGTAGTTCTCGAGAGGCTTGGCGTTCTTGCCTCGCACTGCACACCAA
CCGTTCGACGCAATGCCATAGCGGAGTTCTTGCCTTCCGTGGGCTTGCCT
CCACCATTTCGCCAGGTTATCCTTCCGAGTGGAAACTTTCTTGGGTCACC
AAGGTTCTGCCACGCCACGCCACTGCTGGCATGTCAGATCGTCTCACGGA
CGCCAGTGAAGTACTGAAGGTTCTCAAGTCCACCAGTGCTGACAACGCTG
ATCTCATCGATGCTCGTCGTCAGTTCGCGCGGTCCAACTGGCAGGTCGCC
CTGGCGTTCTTCAACTGGGCGGCGACCCTGCCGGGGTATGCCCACGGGTC
GAGGGCCTACACCAAGATGCTGGACATTCTTGGGCGGATGAAGAAGGTCA
GGCACATGAGGCAGCTGTTTGACGAGATTCCTGAGGAGCGGCGTGGGGAG
GTCGTGACGAATAAGATGTTCGCCGTGCTGTTGAACCGGTACGCGGGTGA
GCACAAGGTGCAGGAGGCGATAGAGGTGTTCTACCTGAGGAAGGATTACG
GGTTTGAGCTCGACTTGGTTGGGTTCCAGATACTCCTGATGTCGCTGTGC
CGTTATAAGCATGTCAAGGAGGCGGAGGCGTTGTTCCGTGAGAAGAAAGG
TGAGTTCCCGCATGTCACAAAGAGCTGGAACATTATACTAAATGGTTGGT
GTGTCAAGGGAAGCTGGAGAGACGCTCTAAGGATTTGGAATGATATCATT
GCATCCAAGGTTGAACGAGACCTGTTCACATATGGAACATTCATAAACGC
ACTGGCCAAAAATGGCAGAATTAGTGCAGCGGTGAAGCTGTTCAAAAGTA
TGTGGGAGAAAGGGATTAATCCTGATGTCGCGATTTGCAATTGTATCATT
GACCATCTGTGCTTCAAGAAACGAATTCCAGAAGCACTTGAGATTTTTGG
TGAGATGAATGACCGGGTTTGTCAAGCCGATGTGGCTACCTACAACACTT
TGATAAAATACTTATGTAAGATAAAAAGGATGGAAAAAGTTTATGAACTT
TTGGATGAAATGGAAGCAAAGGGCTGCTCTCCAAACAATAGGACATACTC
CTATATTCTGAAGACGACTGAGAAACCCAAAGATGTCATTGCTTTGATGC
AGAGGATGGAGCAAACCGGCTGTGAATTGGATTCTGATACATATAACTTA
ATATTGAACCTTTATATCAACTGGAAATATGAGAAGGGGGTGCAACAGGT
ATGGGATGAGATGGAGAGAAGAGGGTCAGGCCCAGATCAACGGTCATTTA
CTATTATGGTTCATGGTCTTCATTCCCAAGGCAAGCTCGATGAGGCTCTG
CAGTATTACACAACAATGAAGTCTAGAGGGATGATTCCAGAACCTAGGAC
CAAGATACTGGTGAAAGCTATGCATATGAAGAAAGACGGCGCTGCCACTG
AAGATGACTCAACAAGTATGGCAGGGAAGCATCTATAA
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