Sh_004G10_t000030

Overview
NameSh_004G10_t000030
Unique NameSh_004G10_t000030
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length282
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004G10contigSh_004G10:8022..9673
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteDoubtful hypothetical protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_004G10_g000030Sh_004G10_g000030R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_004G10_p000030Sh_004G10_p000030R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_004G10_t000030 ID=Sh_004G10_t000030|Name=Sh_004G10_t000030|organism=R570 Sugarcane cultivar|type=mRNA|length=282bp
ATGCGGCGAACCCAACTGCCGGTATCGAGTTTCGACGGGATCGTGAGTCG
CCTCTCTAGGATTAGGAGGTCGACCGCCGCCGCCGTCTCCACCCTCCGCC
CCTCGGCGCTAGGAGGGCGCGGAATCGATTCAGCGATGCCACCCTCACCA
GTTCCCTGCCAGCGGACCGGCGATTGCTCCTTGGCGGCGACCTTAACCAC
GCACAGCTGTACCTCTGCCTCCGGCCTGCATTCATCTCAGCTTCTGTCCT
CCTCGGCTCCGAGTCCGATCCCGCACCTTTAG
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protein sequence of Sh_004G10_p000030

>Sh_004G10_p000030 ID=Sh_004G10_p000030|Name=Sh_004G10_p000030|organism=R570 Sugarcane cultivar|type=polypeptide|length=94bp
MRRTQLPVSSFDGIVSRLSRIRRSTAAAVSTLRPSALGGRGIDSAMPPSP
VPCQRTGDCSLAATLTTHSCTSASGLHSSQLLSSSAPSPIPHL*
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mRNA from alignment at Sh_004G10:8022..9673+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004G10_t000030 ID=Sh_004G10_t000030|Name=Sh_004G10_t000030|organism=R570 Sugarcane cultivar|type=mRNA|length=1652bp|location=Sequence derived from alignment at Sh_004G10:8022..9673+ (R570 Sugarcane cultivar)
CCAAAAGGCTCTTGGAGCGCGCTCTCGGCCGGCATCAGCCGACTGCCGCA GCACTCTCCAAGCGCCGAGCCACCGGCAATGGTTTTCCCCGTCCCCCGCC TTCCCAGGCTCCCAGCCAAGAATCAGGCATGCGGCGAACCCAACTGCCGG TATCGAGTTTCGACGGGATCGTGAGTCGCCTCTCTAGGATTAGGAGGTCG ACCGCCGCCGCCGTCTCCACCCTCCGCCCCTCGGCGCTAGGAGGGCGCGG AATCGATTCAGCGATGCCACCCTCACCAGTTCCCTGCCAGCGGACCGGCG ATTGCTCCTTGGCGGCGACCTTAACCACGCACAGCTGTACCTCTGCCTCC GGCCTGCATTCATCTCAGCTTCTGTCCTCCTCGGCTCCGAGTCCGATCCC GCACCTTTAGCTCACTCTTGAGCCTTGGCTCCTTTGCGCAGACTAAAGGC GCCCCGACAGTCAAGGTGTGAGTGAGTATCCTCTCAATCCTCTTTCCTGT ATGCTTATGTAACATATATTATCATAGGAGCCATCAAGATTACTAATACT ATTTTCTTGTATGCTTATGTGTGGCATACATTTTCCATTCGATATTGGCC CCTTTTGACAGGACCTGCCCTTTGTTGTCTAACCCCTGTTAAATTATGGG TTCTCTAATTTACATCGCGAAATAGTTCCTACATCGCTTGATACTTAATT TCATAAATGTACTACATACCTTAACTGGCAATGGCTGCAACAAATTTCAT CTCAGGTTTACGATTTGAACAATAACAAAATTCTTCCAGCATAGTATGCA TCTACCTGTGGTAAACTATCATCCTTTTGAATTATTAACAAGGGATAACT TATGTTATATTCATTATTGCTGGTCCACCCTGCTCTCTTTATTTGGTGGT AAGCTGGGCCGTCATGCCTTCCTGCTACACAAGTCTTATGAGCAAGCACA ATAATCAACCCATTATAATCGACATGTTAATGACATATGCAGTTAACCAC ACAAAGGCAAACAATGGTTGAAGTTTGTTAATCTCACACAAGTCTTATGA GCAAGCACAATAGTCCACATGCACAAGGGACTGGGATATAGGTAAAAGTA AATGTGCAAAAGAATATTGCCATTGGATTCAAAGGGGACGAACTCCATTT TGGCACTCCAAGAACCTCGGACTCTATCAATTAATATCTAAGGAATAATT TCTTCTAGTACAACCAAGACAGACTTGCAGCATAGAGTTACATGCATTTT CTGATGCACATATCAATGGAAGTTTAAGACCTCATCACCTTTATTCCTTT CAAAATGATAATGATAATCAGCTTAGTAACGTCATTCTGTAAGCTCTAGA GACTTTGTCAACATTCAGGACAGCGACACAAATACCCAAATGCCCAGTAA CATTATGATCCACTCAACTAATTTTGTACTGAGGCTGTAGTGTTAGAACC AGCCACAATTGCTAAAGTGATTTTTTCAATACATAACATGTAAAATTAAT TTTTTAATACATACTCATGCACATATCAATGAATTTGATGGCTATACCCA GATACCCAAATTAATTTGATGGCTATACTCAGATACCCAAATGCGTTTGT AGCGATCCTGGCTGAGGTGCTGGACTGAATGAAGCCATTGAAAAGAAGGT GA
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Coding sequence (CDS) from alignment at Sh_004G10:8022..9673+

>Sh_004G10_t000030 ID=Sh_004G10_t000030|Name=Sh_004G10_t000030|organism=R570 Sugarcane cultivar|type=CDS|length=282bp|location=Sequence derived from alignment at Sh_004G10:8022..9673+ (R570 Sugarcane cultivar)
ATGCGGCGAACCCAACTGCCGGTATCGAGTTTCGACGGGATCGTGAGTCG
CCTCTCTAGGATTAGGAGGTCGACCGCCGCCGCCGTCTCCACCCTCCGCC
CCTCGGCGCTAGGAGGGCGCGGAATCGATTCAGCGATGCCACCCTCACCA
GTTCCCTGCCAGCGGACCGGCGATTGCTCCTTGGCGGCGACCTTAACCAC
GCACAGCTGTACCTCTGCCTCCGGCCTGCATTCATCTCAGCTTCTGTCCT
CCTCGGCTCCGAGTCCGATCCCGCACCTTTAG
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