Sh_004G10_t000060

Overview
NameSh_004G10_t000060
Unique NameSh_004G10_t000060
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length2658
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004G10contigSh_004G10:28635..31293
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteKinase
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_004G10_g000060Sh_004G10_g000060R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_004G10_p000060Sh_004G10_p000060R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_004G10_t000060 ID=Sh_004G10_t000060|Name=Sh_004G10_t000060|organism=R570 Sugarcane cultivar|type=mRNA|length=2658bp
ATGAGATTGCTGCTTGCCGCCACCTTCGTCATGATTGCAGTAGCCTCCTG
GGGAACGCACGGCAGTGCCAGCGACGAGGCCAGTTCTCTGCTCGCTTTCA
AGGCTGAGCTCGCTGGCAGCAGCAGCTCTGGTGTGCTGGCCTCCTGGAAC
GCCAGCACCGGCGTCTGCAGATGGGAAGGCGTGGCGTGCAGCGGCGGCGG
CGGCCAGGTGGTGTCGCTGAGCCTGCCCTCCTACGGGCTCGCCGGCGCGC
TCTCCCCGGCCATCGGGAACCTCACGTTCCTGCGGACGCTGAACCTGAGC
TCCAACTGGTTCCAGGGGGAGATCCCGGAGAGCATTGGCCGCCTAGCGCG
TCTGCAGGCGCTGGACCTGAGCTACAATGCGCTCTCCGGCACGCTGCCCG
CCAGCCTCAGCTCCTGCGTCAGCTTACTGCTGTTGAGCCTTAGCAGCAAC
CAAATCCATGGGCGCATCCCTGTCGAGCTCGGCAACAAGCTCACGTATCT
TCGGGGGCTCTTATTGGCCAACAACAGCCTGACGGGCGCCATCCCAGGAT
CACTAGGTAACCTTTCATCCCTGGACTACCTTGATCTGACAGACAACCAG
CTCGAGGGTCCGGTACCACATGAGCTTGGCAGCATTGGAGGCCTCCAGAC
CCTTTTCCTCTTTGGGAACAGCCTATCGGGTGTGCTTCCACAGTCCCTGT
ACAATCTGTCATCGCTGAAGAACTTCGGGGTAGAATTCAACATGCTGTCT
GGAACTATCCCTGCTGATATTGGCGACAGGTTCCCTGGCATAGAAACCCT
TAGCTTCTCTTACAACCGGTTCAGTGGAGCTATCCCACCTTCGGTCTCCA
ACCTCTCTGCTCTCATAAAACTTGGCCTCGCAGGAAATGGATTTATTGGA
CATGTGCCTCCTGCTCTGGGGAAGTTGCAAGGTCTCACTGTCCTGGACTT
GGGTGACAACAGGCTACAAGCCAACGACAGTCAAGGGTGGGAGTTCATCA
CTTCCCTGACGAACTGCAGCCAGCTTCAGAATCTGATTCTTGGCAACAAC
TCTTTCAGTGGTGAAGTGCCCGGTTCAATCGCCAACCTATCGACGACTCT
CGAAACTCTTTATCTGGGAGACAATAGGATTTCTGGAGCTATTCCATCAG
ACATCGGCAATTTGGTTGGTCTGAAATTACTTGAGATGGCAAATAACTCC
ATATCTGGAGCGATCCCGGAGAGCATTGGGAGACTAGAAAACTTGGTTGA
GTTGGGGCTTTACAACACTAGCTTGTCAGGCCTCATACCTCCGTCACTAG
GAAATCTTACACAGCTGAATAGGCTTTATGCATACTATGGCAATCTAGAG
GGGCCCATTCCAAGGAGCCTGGGAAACTTGAAGAATGTATTTGTCTTTGA
TCTGTCAACAAATCGACTCAATGGTTCAATTCCCAAAGAGGTGCTAAAAC
TTCCTCAGCTTTCTTGGTACTTAGACTTATCATACAATGCATTGTCTGGG
CCACTCCCAGTTGAAGTTGGTAGCTTGGCAAACCTTAACCAACTGATTCT
ATCAGGAAACCAGTTGTCAAGCAGCATACCTGATAGTATTGGTAATTGCA
TATCACTGGAACAGCTGCTGCTGGATCACAACTCATTTGAGGGAACCATA
CCTCAATCTCTGAAGAACTTAAAAGGCCTTGCCTTACTGAACCTGACTAT
GAATAAGCTGTCTGGTAGTATTCCTGATGCTCTGGCCAGTATTGGCAACC
TGCAACAATTGTATCTAGCACACAACAACCTTTCAGGTTTGATTCCAGCA
GTTCTACAGAACCTGACATTGTTGTCAAAACTGGATTTGTCCTTCAATGA
TCTCCAAGGTGAAGTGCCAAAAGGGGGTGTTTTTGCAAATGCAACGTCCT
TGTCGATTCATGGAAATGATGAGATTTGTGGCGGAGCCCCTCAACTACAT
TTAGCTCCATGCTCCATGGCTGCTGTGGAGAAGAACAAAAGGCAAGTGTC
AAGATCCCTTATGGTCACCCTAACATCACTCGGCGCACTTGTATTCTTAG
CTGTAGTAGTTACTTTTATTCATTTGATCCACAAGAGGTTCAGACAAAGA
AAGGCAAGCCAACTCATTTCCACGGTAATTGATGAACAGTATGAAAGGGT
TTCTTATCAAGCATTGTCAAATGGAACTGGTGGATTCTCAGAGGCTAATT
TGCTCGGACAAGGGAGCTATGGTGCTGTTTATAGATGCAATTTGCATGAT
CAGGGTATTACCACAGCTGTAAAGGTGTTTAACATACGACAGTCCTGGTC
TAATAGAAGTTTCGTGGCTGAATGCGAGGCACTGCGAAGGGTACGTCACC
GTTGTCTCATAAAGATCATCACCTGTTGCTCAAGCATCAATTACCAAGGT
GAAGAATTCAAGGCGCTGGTTTTTGAGTTCATGCCGAACGGTAGTCTGAA
TGATTGGCTGCATCCAGTATCTAAAGTACACACTCTGAGTAATACGCTCA
GCCTAGCTCAGAGACTAGACATTGCTGTAGACATCATGGATGCCCTGGAA
TATCTTCACAACCAGTGTCAGCCACCAGTAATCCATTGCGACCTCAAGCC
AAGTAACATCCTCCTTGCAGAGGATATGAGTGCCCGGGTTGGAGATTTCG
GCATTTGA
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protein sequence of Sh_004G10_p000060

>Sh_004G10_p000060 ID=Sh_004G10_p000060|Name=Sh_004G10_p000060|organism=R570 Sugarcane cultivar|type=polypeptide|length=886bp
MRLLLAATFVMIAVASWGTHGSASDEASSLLAFKAELAGSSSSGVLASWN
ASTGVCRWEGVACSGGGGQVVSLSLPSYGLAGALSPAIGNLTFLRTLNLS
SNWFQGEIPESIGRLARLQALDLSYNALSGTLPASLSSCVSLLLLSLSSN
QIHGRIPVELGNKLTYLRGLLLANNSLTGAIPGSLGNLSSLDYLDLTDNQ
LEGPVPHELGSIGGLQTLFLFGNSLSGVLPQSLYNLSSLKNFGVEFNMLS
GTIPADIGDRFPGIETLSFSYNRFSGAIPPSVSNLSALIKLGLAGNGFIG
HVPPALGKLQGLTVLDLGDNRLQANDSQGWEFITSLTNCSQLQNLILGNN
SFSGEVPGSIANLSTTLETLYLGDNRISGAIPSDIGNLVGLKLLEMANNS
ISGAIPESIGRLENLVELGLYNTSLSGLIPPSLGNLTQLNRLYAYYGNLE
GPIPRSLGNLKNVFVFDLSTNRLNGSIPKEVLKLPQLSWYLDLSYNALSG
PLPVEVGSLANLNQLILSGNQLSSSIPDSIGNCISLEQLLLDHNSFEGTI
PQSLKNLKGLALLNLTMNKLSGSIPDALASIGNLQQLYLAHNNLSGLIPA
VLQNLTLLSKLDLSFNDLQGEVPKGGVFANATSLSIHGNDEICGGAPQLH
LAPCSMAAVEKNKRQVSRSLMVTLTSLGALVFLAVVVTFIHLIHKRFRQR
KASQLISTVIDEQYERVSYQALSNGTGGFSEANLLGQGSYGAVYRCNLHD
QGITTAVKVFNIRQSWSNRSFVAECEALRRVRHRCLIKIITCCSSINYQG
EEFKALVFEFMPNGSLNDWLHPVSKVHTLSNTLSLAQRLDIAVDIMDALE
YLHNQCQPPVIHCDLKPSNILLAEDMSARVGDFGI*
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mRNA from alignment at Sh_004G10:28635..31293+

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004G10_t000060 ID=Sh_004G10_t000060|Name=Sh_004G10_t000060|organism=R570 Sugarcane cultivar|type=mRNA|length=2659bp|location=Sequence derived from alignment at Sh_004G10:28635..31293+ (R570 Sugarcane cultivar)
ATGAGATTGCTGCTTGCCGCCACCTTCGTCATGATTGCAGTAGCCTCCTG GGGAACGCACGGCAGTGCCAGCGACGAGGCCAGTTCTCTGCTCGCTTTCA AGGCTGAGCTCGCTGGCAGCAGCAGCTCTGGTGTGCTGGCCTCCTGGAAC GCCAGCACCGGCGTCTGCAGATGGGAAGGCGTGGCGTGCAGCGGCGGCGG CGGCCAGGTGGTGTCGCTGAGCCTGCCCTCCTACGGGCTCGCCGGCGCGC TCTCCCCGGCCATCGGGAACCTCACGTTCCTGCGGACGCTGAACCTGAGC TCCAACTGGTTCCAGGGGGAGATCCCGGAGAGCATTGGCCGCCTAGCGCG TCTGCAGGCGCTGGACCTGAGCTACAATGCGCTCTCCGGCACGCTGCCCG CCAGCCTCAGCTCCTGCGTCAGCTTACTGCTGTTGAGCCTTAGCAGCAAC CAAATCCATGGGCGCATCCCTGTCGAGCTCGGCAACAAGCTCACGTATCT TCGGGGGCTCTTATTGGCCAACAACAGCCTGACGGGCGCCATCCCAGGAT CACTAGGTAACCTTTCATCCCTGGACTACCTTGATCTGACAGACAACCAG CTCGAGGGTCCGGTACCACATGAGCTTGGCAGCATTGGAGGCCTCCAGAC CCTTTTCCTCTTTGGGAACAGCCTATCGGGTGTGCTTCCACAGTCCCTGT ACAATCTGTCATCGCTGAAGAACTTCGGGGTAGAATTCAACATGCTGTCT GGAACTATCCCTGCTGATATTGGCGACAGGTTCCCTGGCATAGAAACCCT TAGCTTCTCTTACAACCGGTTCAGTGGAGCTATCCCACCTTCGGTCTCCA ACCTCTCTGCTCTCATAAAACTTGGCCTCGCAGGAAATGGATTTATTGGA CATGTGCCTCCTGCTCTGGGGAAGTTGCAAGGTCTCACTGTCCTGGACTT GGGTGACAACAGGCTACAAGCCAACGACAGTCAAGGGTGGGAGTTCATCA CTTCCCTGACGAACTGCAGCCAGCTTCAGAATCTGATTCTTGGCAACAAC TCTTTCAGTGGTGAAGTGCCCGGTTCAATCGCCAACCTATCGACGACTCT CGAAACTCTTTATCTGGGAGACAATAGGATTTCTGGAGCTATTCCATCAG ACATCGGCAATTTGGTTGGTCTGAAATTACTTGAGATGGCAAATAACTCC ATATCTGGAGCGATCCCGGAGAGCATTGGGAGACTAGAAAACTTGGTTGA GTTGGGGCTTTACAACACTAGCTTGTCAGGCCTCATACCTCCGTCACTAG GAAATCTTACACAGCTGAATAGGCTTTATGCATACTATGGCAATCTAGAG GGGCCCATTCCAAGGAGCCTGGGAAACTTGAAGAATGTATTTGTCTTTGA TCTGTCAACAAATCGACTCAATGGTTCAATTCCCAAAGAGGTGCTAAAAC TTCCTCAGCTTTCTTGGTACTTAGACTTATCATACAATGCATTGTCTGGG CCACTCCCAGTTGAAGTTGGTAGCTTGGCAAACCTTAACCAACTGATTCT ATCAGGAAACCAGTTGTCAAGCAGCATACCTGATAGTATTGGTAATTGCA TATCACTGGAACAGCTGCTGCTGGATCACAACTCATTTGAGGGAACCATA CCTCAATCTCTGAAGAACTTAAAAGGCCTTGCCTTACTGAACCTGACTAT GAATAAGCTGTCTGGTAGTATTCCTGATGCTCTGGCCAGTATTGGCAACC TGCAACAATTGTATCTAGCACACAACAACCTTTCAGGTTTGATTCCAGCA GTTCTACAGAACCTGACATTGTTGTCAAAACTGGATTTGTCCTTCAATGA TCTCCAAGGTGAAGTGCCAAAAGGGGGTGTTTTTGCAAATGCAACGTCCT TGTCGATTCATGGAAATGATGAGATTTGTGGCGGAGCCCCTCAACTACAT TTAGCTCCATGCTCCATGGCTGCTGTGGAGAAGAACAAAAGGCAAGTGTC AAGATCCCTTATGGTCACCCTAACATCACTCGGCGCACTTGTATTCTTAG CTGTAGTAGTTACTTTTATTCATTTGATCCACAAGAGGTTCAGACAAAGA AAGGCAAGCCAACTCATTTCCACGGTAATTGATGAACAGTATGAAAGGGT TTCTTATCAAGCATTGTCAAATGGAACTGGTGGATTCTCAGAGGCTAATT TGCTCGGACAAGGGAGCTATGGTGCTGTTTATAGATGCAATTTGCATGAT CAGGGTATTACCACAGCTGTAAAGGTGTTTAACATACGACAGTCCTGGTC TAATAGAAGTTTCGTGGCTGAATGCGAGGCACTGCGAAGGGTACGTCACC GTTGTCTCATAAAGATCATCACCTGTTGCTCAAGCATCAATTACCAAGGT GAAGAATTCAAGGCGCTGGTTTTTGAGTTCATGCCGAACGGTAGTCTGAA TGATTGGCTGCATCCAGTATCTAAAGTACACACTCTGAGTAATACGCTCA GCCTAGCTCAGAGACTAGACATTGCTGTAGACATCATGGATGCCCTGGAA TATCTTCACAACCAGTGTCAGCCACCAGTAATCCATTGCGACCTCAAGCC AAGTAACATCCTCCTTGCAGAGGATATGAGTGCCCGGGTTGGAGATTTCG GCATTTGAA
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Coding sequence (CDS) from alignment at Sh_004G10:28635..31293+

>Sh_004G10_t000060 ID=Sh_004G10_t000060|Name=Sh_004G10_t000060|organism=R570 Sugarcane cultivar|type=CDS|length=2658bp|location=Sequence derived from alignment at Sh_004G10:28635..31293+ (R570 Sugarcane cultivar)
ATGAGATTGCTGCTTGCCGCCACCTTCGTCATGATTGCAGTAGCCTCCTG
GGGAACGCACGGCAGTGCCAGCGACGAGGCCAGTTCTCTGCTCGCTTTCA
AGGCTGAGCTCGCTGGCAGCAGCAGCTCTGGTGTGCTGGCCTCCTGGAAC
GCCAGCACCGGCGTCTGCAGATGGGAAGGCGTGGCGTGCAGCGGCGGCGG
CGGCCAGGTGGTGTCGCTGAGCCTGCCCTCCTACGGGCTCGCCGGCGCGC
TCTCCCCGGCCATCGGGAACCTCACGTTCCTGCGGACGCTGAACCTGAGC
TCCAACTGGTTCCAGGGGGAGATCCCGGAGAGCATTGGCCGCCTAGCGCG
TCTGCAGGCGCTGGACCTGAGCTACAATGCGCTCTCCGGCACGCTGCCCG
CCAGCCTCAGCTCCTGCGTCAGCTTACTGCTGTTGAGCCTTAGCAGCAAC
CAAATCCATGGGCGCATCCCTGTCGAGCTCGGCAACAAGCTCACGTATCT
TCGGGGGCTCTTATTGGCCAACAACAGCCTGACGGGCGCCATCCCAGGAT
CACTAGGTAACCTTTCATCCCTGGACTACCTTGATCTGACAGACAACCAG
CTCGAGGGTCCGGTACCACATGAGCTTGGCAGCATTGGAGGCCTCCAGAC
CCTTTTCCTCTTTGGGAACAGCCTATCGGGTGTGCTTCCACAGTCCCTGT
ACAATCTGTCATCGCTGAAGAACTTCGGGGTAGAATTCAACATGCTGTCT
GGAACTATCCCTGCTGATATTGGCGACAGGTTCCCTGGCATAGAAACCCT
TAGCTTCTCTTACAACCGGTTCAGTGGAGCTATCCCACCTTCGGTCTCCA
ACCTCTCTGCTCTCATAAAACTTGGCCTCGCAGGAAATGGATTTATTGGA
CATGTGCCTCCTGCTCTGGGGAAGTTGCAAGGTCTCACTGTCCTGGACTT
GGGTGACAACAGGCTACAAGCCAACGACAGTCAAGGGTGGGAGTTCATCA
CTTCCCTGACGAACTGCAGCCAGCTTCAGAATCTGATTCTTGGCAACAAC
TCTTTCAGTGGTGAAGTGCCCGGTTCAATCGCCAACCTATCGACGACTCT
CGAAACTCTTTATCTGGGAGACAATAGGATTTCTGGAGCTATTCCATCAG
ACATCGGCAATTTGGTTGGTCTGAAATTACTTGAGATGGCAAATAACTCC
ATATCTGGAGCGATCCCGGAGAGCATTGGGAGACTAGAAAACTTGGTTGA
GTTGGGGCTTTACAACACTAGCTTGTCAGGCCTCATACCTCCGTCACTAG
GAAATCTTACACAGCTGAATAGGCTTTATGCATACTATGGCAATCTAGAG
GGGCCCATTCCAAGGAGCCTGGGAAACTTGAAGAATGTATTTGTCTTTGA
TCTGTCAACAAATCGACTCAATGGTTCAATTCCCAAAGAGGTGCTAAAAC
TTCCTCAGCTTTCTTGGTACTTAGACTTATCATACAATGCATTGTCTGGG
CCACTCCCAGTTGAAGTTGGTAGCTTGGCAAACCTTAACCAACTGATTCT
ATCAGGAAACCAGTTGTCAAGCAGCATACCTGATAGTATTGGTAATTGCA
TATCACTGGAACAGCTGCTGCTGGATCACAACTCATTTGAGGGAACCATA
CCTCAATCTCTGAAGAACTTAAAAGGCCTTGCCTTACTGAACCTGACTAT
GAATAAGCTGTCTGGTAGTATTCCTGATGCTCTGGCCAGTATTGGCAACC
TGCAACAATTGTATCTAGCACACAACAACCTTTCAGGTTTGATTCCAGCA
GTTCTACAGAACCTGACATTGTTGTCAAAACTGGATTTGTCCTTCAATGA
TCTCCAAGGTGAAGTGCCAAAAGGGGGTGTTTTTGCAAATGCAACGTCCT
TGTCGATTCATGGAAATGATGAGATTTGTGGCGGAGCCCCTCAACTACAT
TTAGCTCCATGCTCCATGGCTGCTGTGGAGAAGAACAAAAGGCAAGTGTC
AAGATCCCTTATGGTCACCCTAACATCACTCGGCGCACTTGTATTCTTAG
CTGTAGTAGTTACTTTTATTCATTTGATCCACAAGAGGTTCAGACAAAGA
AAGGCAAGCCAACTCATTTCCACGGTAATTGATGAACAGTATGAAAGGGT
TTCTTATCAAGCATTGTCAAATGGAACTGGTGGATTCTCAGAGGCTAATT
TGCTCGGACAAGGGAGCTATGGTGCTGTTTATAGATGCAATTTGCATGAT
CAGGGTATTACCACAGCTGTAAAGGTGTTTAACATACGACAGTCCTGGTC
TAATAGAAGTTTCGTGGCTGAATGCGAGGCACTGCGAAGGGTACGTCACC
GTTGTCTCATAAAGATCATCACCTGTTGCTCAAGCATCAATTACCAAGGT
GAAGAATTCAAGGCGCTGGTTTTTGAGTTCATGCCGAACGGTAGTCTGAA
TGATTGGCTGCATCCAGTATCTAAAGTACACACTCTGAGTAATACGCTCA
GCCTAGCTCAGAGACTAGACATTGCTGTAGACATCATGGATGCCCTGGAA
TATCTTCACAACCAGTGTCAGCCACCAGTAATCCATTGCGACCTCAAGCC
AAGTAACATCCTCCTTGCAGAGGATATGAGTGCCCGGGTTGGAGATTTCG
GCATTTGA
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