Sh_004G10_t000070

Overview
NameSh_004G10_t000070
Unique NameSh_004G10_t000070
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length246
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004G10contigSh_004G10:31635..32317
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteConserved hypothetical protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_004G10_g000070Sh_004G10_g000070R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_004G10_p000070Sh_004G10_p000070R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_004G10_t000070 ID=Sh_004G10_t000070|Name=Sh_004G10_t000070|organism=R570 Sugarcane cultivar|type=mRNA|length=246bp
ATGAGGTACGCGTCTCTGATCGCACGCATCTCCACAGCAGCATCTCGCAT
CGCCATTCGCTCTCTTGGCTGCTGCTTTGAGCATGAGACGCCGAGCCGGA
TCGCTGAAACCAAGCACTCCTCGCTCCGGCTTCTCATTGTCGCAGCATCA
GCAGGATCTTTTGCCTTCGCTTCTTCGTGCAGCCAGATTGCTGGGTCGGC
TATCTCCGAGGCTCCGTTGGGAGGAGCGGCTTCGGCGAACCTATGA
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protein sequence of Sh_004G10_p000070

>Sh_004G10_p000070 ID=Sh_004G10_p000070|Name=Sh_004G10_p000070|organism=R570 Sugarcane cultivar|type=polypeptide|length=82bp
MRYASLIARISTAASRIAIRSLGCCFEHETPSRIAETKHSSLRLLIVAAS
AGSFAFASSCSQIAGSAISEAPLGGAASANL*
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mRNA from alignment at Sh_004G10:31635..32317-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004G10_t000070 ID=Sh_004G10_t000070|Name=Sh_004G10_t000070|organism=R570 Sugarcane cultivar|type=mRNA|length=683bp|location=Sequence derived from alignment at Sh_004G10:31635..32317- (R570 Sugarcane cultivar)
GCAAAAAAAATGAATGAAGGTTCTAAACCGTACAATGATTTAGTTCAGAA CTGGGCCTCTGCTTTACTGCTTCTATGATTTTGAACATTAGAAACTTAAG CCTGGTTCCAAACTCTTGAATTTGGCATTATGTAAAAAGAAGATTTCTCG TCACATCAAATTTGCGGTATATGCATAAAGTACTAAATATAGACGAAATC AAAAATTAATTGCACAGTTTAGTTGTACTTTACGAAACGAATGTTTTTAG CCTAATTAGTCAATGGTAAGACAATTATTACCAAATACAAACAAAATACT ATATTTTGCTACAGTGCCAAATAGTGAATTTAGCACTGCCAGATTCGGCA ACTAAACGTGGCCTTAATCAGAAAGGTGCCTCGGCGGCTTGCTTGCTTCT GTTGCAGATCCCCGTCCAGCTAGCTGGCAACCATGAGGTACGCGTCTCTG ATCGCACGCATCTCCACAGCAGCATCTCGCATCGCCATTCGCTCTCTTGG CTGCTGCTTTGAGCATGAGACGCCGAGCCGGATCGCTGAAACCAAGCACT CCTCGCTCCGGCTTCTCATTGTCGCAGCATCAGCAGGATCTTTTGCCTTC GCTTCTTCGTGCAGCCAGATTGCTGGGTCGGCTATCTCCGAGGCTCCGTT GGGAGGAGCGGCTTCGGCGAACCTATGAAGGTC
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Coding sequence (CDS) from alignment at Sh_004G10:31635..32317-

>Sh_004G10_t000070 ID=Sh_004G10_t000070|Name=Sh_004G10_t000070|organism=R570 Sugarcane cultivar|type=CDS|length=246bp|location=Sequence derived from alignment at Sh_004G10:31635..32317- (R570 Sugarcane cultivar)
ATGAGGTACGCGTCTCTGATCGCACGCATCTCCACAGCAGCATCTCGCAT
CGCCATTCGCTCTCTTGGCTGCTGCTTTGAGCATGAGACGCCGAGCCGGA
TCGCTGAAACCAAGCACTCCTCGCTCCGGCTTCTCATTGTCGCAGCATCA
GCAGGATCTTTTGCCTTCGCTTCTTCGTGCAGCCAGATTGCTGGGTCGGC
TATCTCCGAGGCTCCGTTGGGAGGAGCGGCTTCGGCGAACCTATGA
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