Sh_004G10_t000090

Overview
NameSh_004G10_t000090
Unique NameSh_004G10_t000090
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length1068
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004G10contigSh_004G10:55293..56360
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteLRR-kinase protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_004G10_g000090Sh_004G10_g000090R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_004G10_p000090Sh_004G10_p000090R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_004G10_t000090 ID=Sh_004G10_t000090|Name=Sh_004G10_t000090|organism=R570 Sugarcane cultivar|type=mRNA|length=1068bp
ATGTTGCTGTTGCTGGTACCTTTCTCCATGTCCATCTGGAATCTTGCGGC
CGGACAAGCCAACGACGACGAGGTCGCGCTGCTGGCCTTCAAGGCCGCGG
CGACCAGCGGCAGCTCCGACGACCCTCTTGCATCGTGGAACCGTAGCACA
GGCCAATACTGCAGCTGGGAGGGGGTGAGGTGTGGAGGCAGGCACCGGCG
AGTGGTGGAGCTGAGCCTGCCCTCCCACGGGCTCACCGGCTTCCTTTCCC
CGGCTGTCGGCAACCTCTCATCGCTCAGGGTTCTCAACCTTACCACCAAT
AGGCTCAGCGGGGCTATTCCGGCGAGCCTGGGCCGCCTGCGCCACCTCCG
TGCCCTCAACCTGAGCCTAAATGGCTTCTCCGGTGAGCTCCCTGCTAACC
TCACCTCCTGCACCAGGCTAGCAGTTCTGGGCCTCCAGTCCAATCAGCTC
CACGGTCGCATCCCCTCCGACCTCGGCAAGCTGACGCGTCTAGAGACGCT
TATACTATGGCAAAACAGGCTCACCGGCGCCATCCCGGCAACTCTGGGCA
ACATGTCGTCGCTGGGTTTCCTTTCCCTGGCGTTCAACCAGCTCGAGGGT
ACCATTCCGCCTGGCCTGGGTGGCATCGCAGGCCTCCACAAACTCGACCT
CGCCTTTGCAAGTCTTAATAACCTAGTTCTGTCAGGAAACCAATTGTCGG
GTGAAATACCCGATAGCATCGGGGATTGTGCCGTTCTGCAAGGGCTTTGG
TTGGACCATAACTCATTTGAGGGGAGCATACCTCAATCTCTGAACAAAAT
AAAGGGCCTGAGTACACTTAATCTGTCCTTGAATAAACTGTACGGTGCTA
TTCCTGATGCCATTGGTGGTATACATAACCTTGGACAATTGAATCTGGCA
TACAATAACTTGTCAGGCACAATCCCTACAAGTCTGCAGAATTTGATTTT
GTTGTCAGAATTGGATCTGTCCTTCAACAATCTGCAAGGAGAAGTGCCAA
AAGAGGGGATTTTCAGATATTTGACTAAATTTTCAATCACTGGAAATAAT
GAGCTTTGTGGTGGATGA
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protein sequence of Sh_004G10_p000090

>Sh_004G10_p000090 ID=Sh_004G10_p000090|Name=Sh_004G10_p000090|organism=R570 Sugarcane cultivar|type=polypeptide|length=356bp
MLLLLVPFSMSIWNLAAGQANDDEVALLAFKAAATSGSSDDPLASWNRST
GQYCSWEGVRCGGRHRRVVELSLPSHGLTGFLSPAVGNLSSLRVLNLTTN
RLSGAIPASLGRLRHLRALNLSLNGFSGELPANLTSCTRLAVLGLQSNQL
HGRIPSDLGKLTRLETLILWQNRLTGAIPATLGNMSSLGFLSLAFNQLEG
TIPPGLGGIAGLHKLDLAFASLNNLVLSGNQLSGEIPDSIGDCAVLQGLW
LDHNSFEGSIPQSLNKIKGLSTLNLSLNKLYGAIPDAIGGIHNLGQLNLA
YNNLSGTIPTSLQNLILLSELDLSFNNLQGEVPKEGIFRYLTKFSITGNN
ELCGG*
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mRNA from alignment at Sh_004G10:55293..56360+

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004G10_t000090 ID=Sh_004G10_t000090|Name=Sh_004G10_t000090|organism=R570 Sugarcane cultivar|type=mRNA|length=1068bp|location=Sequence derived from alignment at Sh_004G10:55293..56360+ (R570 Sugarcane cultivar)
ATGTTGCTGTTGCTGGTACCTTTCTCCATGTCCATCTGGAATCTTGCGGC CGGACAAGCCAACGACGACGAGGTCGCGCTGCTGGCCTTCAAGGCCGCGG CGACCAGCGGCAGCTCCGACGACCCTCTTGCATCGTGGAACCGTAGCACA GGCCAATACTGCAGCTGGGAGGGGGTGAGGTGTGGAGGCAGGCACCGGCG AGTGGTGGAGCTGAGCCTGCCCTCCCACGGGCTCACCGGCTTCCTTTCCC CGGCTGTCGGCAACCTCTCATCGCTCAGGGTTCTCAACCTTACCACCAAT AGGCTCAGCGGGGCTATTCCGGCGAGCCTGGGCCGCCTGCGCCACCTCCG TGCCCTCAACCTGAGCCTAAATGGCTTCTCCGGTGAGCTCCCTGCTAACC TCACCTCCTGCACCAGGCTAGCAGTTCTGGGCCTCCAGTCCAATCAGCTC CACGGTCGCATCCCCTCCGACCTCGGCAAGCTGACGCGTCTAGAGACGCT TATACTATGGCAAAACAGGCTCACCGGCGCCATCCCGGCAACTCTGGGCA ACATGTCGTCGCTGGGTTTCCTTTCCCTGGCGTTCAACCAGCTCGAGGGT ACCATTCCGCCTGGCCTGGGTGGCATCGCAGGCCTCCACAAACTCGACCT CGCCTTTGCAAGTCTTAATAACCTAGTTCTGTCAGGAAACCAATTGTCGG GTGAAATACCCGATAGCATCGGGGATTGTGCCGTTCTGCAAGGGCTTTGG TTGGACCATAACTCATTTGAGGGGAGCATACCTCAATCTCTGAACAAAAT AAAGGGCCTGAGTACACTTAATCTGTCCTTGAATAAACTGTACGGTGCTA TTCCTGATGCCATTGGTGGTATACATAACCTTGGACAATTGAATCTGGCA TACAATAACTTGTCAGGCACAATCCCTACAAGTCTGCAGAATTTGATTTT GTTGTCAGAATTGGATCTGTCCTTCAACAATCTGCAAGGAGAAGTGCCAA AAGAGGGGATTTTCAGATATTTGACTAAATTTTCAATCACTGGAAATAAT GAGCTTTGTGGTGGATGA
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Coding sequence (CDS) from alignment at Sh_004G10:55293..56360+

>Sh_004G10_t000090 ID=Sh_004G10_t000090|Name=Sh_004G10_t000090|organism=R570 Sugarcane cultivar|type=CDS|length=1068bp|location=Sequence derived from alignment at Sh_004G10:55293..56360+ (R570 Sugarcane cultivar)
ATGTTGCTGTTGCTGGTACCTTTCTCCATGTCCATCTGGAATCTTGCGGC
CGGACAAGCCAACGACGACGAGGTCGCGCTGCTGGCCTTCAAGGCCGCGG
CGACCAGCGGCAGCTCCGACGACCCTCTTGCATCGTGGAACCGTAGCACA
GGCCAATACTGCAGCTGGGAGGGGGTGAGGTGTGGAGGCAGGCACCGGCG
AGTGGTGGAGCTGAGCCTGCCCTCCCACGGGCTCACCGGCTTCCTTTCCC
CGGCTGTCGGCAACCTCTCATCGCTCAGGGTTCTCAACCTTACCACCAAT
AGGCTCAGCGGGGCTATTCCGGCGAGCCTGGGCCGCCTGCGCCACCTCCG
TGCCCTCAACCTGAGCCTAAATGGCTTCTCCGGTGAGCTCCCTGCTAACC
TCACCTCCTGCACCAGGCTAGCAGTTCTGGGCCTCCAGTCCAATCAGCTC
CACGGTCGCATCCCCTCCGACCTCGGCAAGCTGACGCGTCTAGAGACGCT
TATACTATGGCAAAACAGGCTCACCGGCGCCATCCCGGCAACTCTGGGCA
ACATGTCGTCGCTGGGTTTCCTTTCCCTGGCGTTCAACCAGCTCGAGGGT
ACCATTCCGCCTGGCCTGGGTGGCATCGCAGGCCTCCACAAACTCGACCT
CGCCTTTGCAAGTCTTAATAACCTAGTTCTGTCAGGAAACCAATTGTCGG
GTGAAATACCCGATAGCATCGGGGATTGTGCCGTTCTGCAAGGGCTTTGG
TTGGACCATAACTCATTTGAGGGGAGCATACCTCAATCTCTGAACAAAAT
AAAGGGCCTGAGTACACTTAATCTGTCCTTGAATAAACTGTACGGTGCTA
TTCCTGATGCCATTGGTGGTATACATAACCTTGGACAATTGAATCTGGCA
TACAATAACTTGTCAGGCACAATCCCTACAAGTCTGCAGAATTTGATTTT
GTTGTCAGAATTGGATCTGTCCTTCAACAATCTGCAAGGAGAAGTGCCAA
AAGAGGGGATTTTCAGATATTTGACTAAATTTTCAATCACTGGAAATAAT
GAGCTTTGTGGTGGATGA
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