Sh_004L19_t000020

Overview
NameSh_004L19_t000020
Unique NameSh_004L19_t000020
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length375
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004L19contigSh_004L19:10385..10759
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteHypothetical protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_004L19_g000020Sh_004L19_g000020R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_004L19_p000020Sh_004L19_p000020R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_004L19_t000020 ID=Sh_004L19_t000020|Name=Sh_004L19_t000020|organism=R570 Sugarcane cultivar|type=mRNA|length=375bp
ATGCCGCGGCTCCTACAAGACGAGCAGGACGATGCTCGCCAGCCGCCGCC
ACGCTTACGCAAACCACCGCGCGCGGCTGCACTGGTCGCCTCCGCTTCCG
CTACCACCAACGCGGACCGCCGCCACGCTCGGGAGAGGATGGCGGCGGCG
GGTGATACTGATATGGTGTGGGTGCGCGTGTTGGAGGAAGGGGTGTTCCG
GTTCGACGCGTCGGAGGCAGCGCGAGCCGCGGCGGGGCCCAGCCTCTCGT
TCGCCGATCCGCGGCGGCGGGAGGTGCCGAGGGAGGGAAGCGACGAGCCG
GCGGTCCTCCCGACGTGCGAGGTCGTGGGGGCTGTCCAGAAGGTCGTCCT
CAAGGTACGGGGCATGCATGTGTGA
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protein sequence of Sh_004L19_p000020

>Sh_004L19_p000020 ID=Sh_004L19_p000020|Name=Sh_004L19_p000020|organism=R570 Sugarcane cultivar|type=polypeptide|length=125bp
MPRLLQDEQDDARQPPPRLRKPPRAAALVASASATTNADRRHARERMAAA
GDTDMVWVRVLEEGVFRFDASEAARAAAGPSLSFADPRRREVPREGSDEP
AVLPTCEVVGAVQKVVLKVRGMHV*
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mRNA from alignment at Sh_004L19:10385..10759-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004L19_t000020 ID=Sh_004L19_t000020|Name=Sh_004L19_t000020|organism=R570 Sugarcane cultivar|type=mRNA|length=375bp|location=Sequence derived from alignment at Sh_004L19:10385..10759- (R570 Sugarcane cultivar)
ATGCCGCGGCTCCTACAAGACGAGCAGGACGATGCTCGCCAGCCGCCGCC ACGCTTACGCAAACCACCGCGCGCGGCTGCACTGGTCGCCTCCGCTTCCG CTACCACCAACGCGGACCGCCGCCACGCTCGGGAGAGGATGGCGGCGGCG GGTGATACTGATATGGTGTGGGTGCGCGTGTTGGAGGAAGGGGTGTTCCG GTTCGACGCGTCGGAGGCAGCGCGAGCCGCGGCGGGGCCCAGCCTCTCGT TCGCCGATCCGCGGCGGCGGGAGGTGCCGAGGGAGGGAAGCGACGAGCCG GCGGTCCTCCCGACGTGCGAGGTCGTGGGGGCTGTCCAGAAGGTCGTCCT CAAGGTACGGGGCATGCATGTGTGA
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Coding sequence (CDS) from alignment at Sh_004L19:10385..10759-

>Sh_004L19_t000020 ID=Sh_004L19_t000020|Name=Sh_004L19_t000020|organism=R570 Sugarcane cultivar|type=CDS|length=375bp|location=Sequence derived from alignment at Sh_004L19:10385..10759- (R570 Sugarcane cultivar)
ATGCCGCGGCTCCTACAAGACGAGCAGGACGATGCTCGCCAGCCGCCGCC
ACGCTTACGCAAACCACCGCGCGCGGCTGCACTGGTCGCCTCCGCTTCCG
CTACCACCAACGCGGACCGCCGCCACGCTCGGGAGAGGATGGCGGCGGCG
GGTGATACTGATATGGTGTGGGTGCGCGTGTTGGAGGAAGGGGTGTTCCG
GTTCGACGCGTCGGAGGCAGCGCGAGCCGCGGCGGGGCCCAGCCTCTCGT
TCGCCGATCCGCGGCGGCGGGAGGTGCCGAGGGAGGGAAGCGACGAGCCG
GCGGTCCTCCCGACGTGCGAGGTCGTGGGGGCTGTCCAGAAGGTCGTCCT
CAAGGTACGGGGCATGCATGTGTGA
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