Sh_004L19_t000050

Overview
NameSh_004L19_t000050
Unique NameSh_004L19_t000050
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length837
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004L19contigSh_004L19:58365..60048
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteG-type lectin S-receptor-like serine/threonine-protein kinase B120
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_004L19_g000050Sh_004L19_g000050R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_004L19_p000050Sh_004L19_p000050R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_004L19_t000050 ID=Sh_004L19_t000050|Name=Sh_004L19_t000050|organism=R570 Sugarcane cultivar|type=mRNA|length=837bp
ATGAATTTAGTAAGACTCTTGGGATGCTGCATTCAAGGAGAAGAGAAGAT
ATTGATATATGAATACATGTCAAATAGAAGTTTGGACTTCTTTATCTTTG
ATACAACAAGAAGAACATTATTAAACTGGAACAAGAGGCGTCATATAATT
GAAGGGATAGCTCAAGGACTGTTGTACCTCCACAAGCACTCACGCCTTCG
GGTCATACACAGAGACCTAAAAGCGAGCAATATTCTCTTAGACGATAATA
TGAGCCCTAAGATTTCTGATTTTGGACTTGCTCGAATATTTGGATCAAAT
GAAACTCATGCAAACACAAGTAGAGTTGTGGGGACCTATGGTTATATGGC
TCCTGAGTATGCATCGGAGGGCCTATTCTCGGTCAAGGCTCCTGAGTATG
CATCGGAGGGCCTATTCTCGGTCAAATCTGACGTCTTCAGTTTTGGAGTG
CTGCTCTTGGAAATAATTAGTGGTAAACGAAACATTGGGTTTCATGAAAC
AGGGAATTTTCCACATCTTCTTGGATATGCATGGATTCTATGGAAAGAGG
AAAAGTGGAATGAAGTTATTGACCCGTGTCTAGATACTAGTCATCAAAAC
ATGGAGGTAAGGAGATTAATCAACATCGCACTAATGTGCGTGCAAGACAA
CGCTGTAGATCGACCAAACATGACAGATATTATCTCTCTTCTTATGAACG
AGAGCACAAGCTTGCCCGAGCCAAAACAGCCAGCTTACTTCAATATAAGG
ACAGTGAACAAAGAAGAATGTGTGATTGATTTAGAGAAATCAAACAGCAT
AAATGATGTTACCAGCTCGCACCCAAATGGTAGATAG
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protein sequence of Sh_004L19_p000050

>Sh_004L19_p000050 ID=Sh_004L19_p000050|Name=Sh_004L19_p000050|organism=R570 Sugarcane cultivar|type=polypeptide|length=279bp
MNLVRLLGCCIQGEEKILIYEYMSNRSLDFFIFDTTRRTLLNWNKRRHII
EGIAQGLLYLHKHSRLRVIHRDLKASNILLDDNMSPKISDFGLARIFGSN
ETHANTSRVVGTYGYMAPEYASEGLFSVKAPEYASEGLFSVKSDVFSFGV
LLLEIISGKRNIGFHETGNFPHLLGYAWILWKEEKWNEVIDPCLDTSHQN
MEVRRLINIALMCVQDNAVDRPNMTDIISLLMNESTSLPEPKQPAYFNIR
TVNKEECVIDLEKSNSINDVTSSHPNGR*
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mRNA from alignment at Sh_004L19:58365..60048+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004L19_t000050 ID=Sh_004L19_t000050|Name=Sh_004L19_t000050|organism=R570 Sugarcane cultivar|type=mRNA|length=1684bp|location=Sequence derived from alignment at Sh_004L19:58365..60048+ (R570 Sugarcane cultivar)
CATGAATTTAGTAAGACTCTTGGGATGCTGCATTCAAGGAGAAGAGAAGA TATTGATATATGAATACATGTCAAATAGAAGTTTGGACTTCTTTATCTTT GGTATGTCATACAAAGTTCTCTTATATACAATATAATAACTCATGTTCGC CATGCTTTGCAGTTTGTTGCACCTCTATTGTATTTATATGCCATTTGCCA TGTATACACAGATACAACAAGAAGAACATTATTAAACTGGAACAAGAGGC GTCATATAATTGAAGGGATAGCTCAAGGACTGTTGTACCTCCACAAGCAC TCACGCCTTCGGGTCATACACAGAGACCTAAAAGCGAGCAATATTCTCTT AGACGATAATATGAGCCCTAAGATTTCTGATTTTGGACTTGCTCGAATAT TTGGATCAAATGAAACTCATGCAAACACAAGTAGAGTTGTGGGGACCTAG TAAGATCATAGCCTAGCTATAGTACTAATCATAACATCTAAATGAACATT TGTTTTTGTCAATTAGAAATTTGATTTAGTCTATTTGTTCCGTGTAGTGG TTATATGGCTCCTGAGTATGCATCGGAGGGCCTATTCTCGGTCAAGGCTC CTGAGTATGCATCGGAGGGCCTATTCTCGGTCAAATCTGACGTCTTCAGT TTTGGAGTGCTGCTCTTGGAAATAATTAGTGGTAAACGAAACATTGGGTT TCATGAAACAGGGAATTTTCCACATCTTCTTGGATATGTGAGTAACACTG ACCTTTCCTTTTCAAAGATATGTGAGTAAAATTTACCGAAAAGGAAAAGT ACTACAATAGTTGTGTAACTTATCCTCTAATAATAATTTGTTTTGTTTCA TGACTAATTACTTTAATTTACTAATCTTGTTTTAGACATAAATTTCACTA CATCAAGGTTATCGGTATTTTAACCTGCTACTAATTCTCTATAACTAATA ATGTTATTTGTAAGAATATTATATTTATTTCACTTAACAAATACTCCATC CAGTTCCATAGCTCTTGTCATTTTGGACAAGATTGCGGTCAAACCTTTTA AACTTTAACTATAAATTACTTTTAAAGTACTTAGTTTGAAGAGACTAAGA CAATATGTACATATTAGTCTTAAAAAGTACTTTATTAAATTTTTATATTT GCTATTTTTTGGTGTGTGTATAGTAAACAAGTTATATTCCCCCTCAAAAG AAACAAAGTTACATTTTAGAGACCGCGGCGCTGCCCAAAACGACATGAAT CATGAAACACAAAGGATTTCTGTTGCACTAATTCATTTTGAGTATGTTTT CCACTACATTAGTTCATTATCACTTATCACTACCACATTTTCAGGCATGG ATTCTATGGAAAGAGGAAAAGTGGAATGAAGTTATTGACCCGTGTCTAGA TACTAGTCATCAAAACATGGAGGTAAGGAGATTAATCAACATCGCACTAA TGTGCGTGCAAGACAACGCTGTAGATCGACCAAACATGACAGATATTATC TCTCTTCTTATGAACGAGAGCACAAGCTTGCCCGAGCCAAAACAGCCAGC TTACTTCAATATAAGGACAGTGAACAAAGAAGAATGTGTGATTGATTTAG AGAAATCAAACAGCATAAATGATGTTACCAGCTCGCACCCAAATGGTAGA TAGATGGACTGTATGCTTGACTCCACTCTATTTT
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Coding sequence (CDS) from alignment at Sh_004L19:58365..60048+

>Sh_004L19_t000050 ID=Sh_004L19_t000050|Name=Sh_004L19_t000050|organism=R570 Sugarcane cultivar|type=CDS|length=837bp|location=Sequence derived from alignment at Sh_004L19:58365..60048+ (R570 Sugarcane cultivar)
ATGAATTTAGTAAGACTCTTGGGATGCTGCATTCAAGGAGAAGAGAAGAT
ATTGATATATGAATACATGTCAAATAGAAGTTTGGACTTCTTTATCTTTG
ATACAACAAGAAGAACATTATTAAACTGGAACAAGAGGCGTCATATAATT
GAAGGGATAGCTCAAGGACTGTTGTACCTCCACAAGCACTCACGCCTTCG
GGTCATACACAGAGACCTAAAAGCGAGCAATATTCTCTTAGACGATAATA
TGAGCCCTAAGATTTCTGATTTTGGACTTGCTCGAATATTTGGATCAAAT
GAAACTCATGCAAACACAAGTAGAGTTGTGGGGACCTATGGTTATATGGC
TCCTGAGTATGCATCGGAGGGCCTATTCTCGGTCAAGGCTCCTGAGTATG
CATCGGAGGGCCTATTCTCGGTCAAATCTGACGTCTTCAGTTTTGGAGTG
CTGCTCTTGGAAATAATTAGTGGTAAACGAAACATTGGGTTTCATGAAAC
AGGGAATTTTCCACATCTTCTTGGATATGCATGGATTCTATGGAAAGAGG
AAAAGTGGAATGAAGTTATTGACCCGTGTCTAGATACTAGTCATCAAAAC
ATGGAGGTAAGGAGATTAATCAACATCGCACTAATGTGCGTGCAAGACAA
CGCTGTAGATCGACCAAACATGACAGATATTATCTCTCTTCTTATGAACG
AGAGCACAAGCTTGCCCGAGCCAAAACAGCCAGCTTACTTCAATATAAGG
ACAGTGAACAAAGAAGAATGTGTGATTGATTTAGAGAAATCAAACAGCAT
AAATGATGTTACCAGCTCGCACCCAAATGGTAGATAG
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