Sh_004L21_g000050

Overview
NameSh_004L21_g000050
Unique NameSh_004L21_g000050
Typegene
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length5223
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_004L21contigSh_004L21:36145..41367
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteSomatic embryogenesis receptor kinase-1
TypemRNA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
Sh_004L21_t000050Sh_004L21_t000050R570 Sugarcane cultivarmRNA


Sequences
The following sequences are available for this feature:

gene sequence

>Sh_004L21_g000050 ID=Sh_004L21_g000050|Name=Sh_004L21_g000050|organism=R570 Sugarcane cultivar|type=gene|length=5223bp
TTTCGACCCCCGAGAGGCGGGTCGGGCGCCGGAGGGATGGCGGCGTCGCT
GAGGTGGTGGTGGTCGGCGGTGGTATTGTCGGTGGTGGTCGGCGTGAGCC
CGGTTGTCGCCAACACGGAGGGTATGCGTACGCCACTGCTTCATGATATC
TGTGGTTTATTTTCTTCATAGTTTGATGAGTAGCCCGCAGCGGAGCGAAT
TTCCTTCTAGGGGGATAATGGCTGAAAATCTGGGGATGGTGTCCAGAAAT
CTAGTGTTTGTTAGCGTTCTACAGGCCTCTGTTGATGGGCGGGGACTGAA
CAGGGGATGAAACGATAGCCTGTAGTTCTCATTTCCAGCGCTTTGACGGA
TTGCTTTGGGGGGCGCGGTGTTTGTCTCTCCTAGTGTTTTTGTCATTTTG
TACTATATATACGGCAATGTTTGTATGACAGGCGTTGTTTTGTTACATCT
GGAAAGGTTGGTTGCACAAACCTGGAAGGGCAATTCGTTCTGGAACAAAT
GCGGTCTATGCACAGAAGTGTAGATTCTGGTTTCTACTCGTGTCACCGTC
TAGAACTATTTTGGGCCTCAAGGTTCCAAAGGAACTATTTTAGGCTCTGT
CGAAATTGTTGCCTTTAAGTTTTTTCTATGAAGGTGCATATGCAGGGCTT
ATTTATTTATTTTTTTCTGATGCAAAACTTTGGTCTTTGATTCACTACTA
CACAGTAAATTTTCATTCCATTTCACCATTGAATCTGAACTAAGATGATT
GTTTTTGTTTATTTGGCTAAAGATAGAATTAGTACTCATGGAAGCTGGAG
GAAAGAAATTCTGATTACTGAACCTTATCTGTTGGGTTGGGAGATGGGGA
GATCACTATACTTAGTTATAATTGTCTCATTAATTTGTTCAGGCATCATA
TATGGACTAATATATTAACGGTACGTTGTTAACGAACAACCTGTACTTTC
TATCTAAATAAAGCGGTGTCATTTAGAATGAACTGAAGCTACATAACGAA
AAAAATGAATGCGTACGTTACTTTCTTAAAACTGAGCATCCTACGGACGT
GCAAACTAATTGCGAAGAATCGGAAAGCATGGCTTAATCATTAAGAGTGC
ATTGTTTAGAGTGTTTTTTTTACCATTCTTCCTAGTACACATGTGGAAAG
AAACCGCATTGCCTTAAATGCTAGTGATTTTTACATGGTGGCTGTATCCT
TGAAATGGATAGTAACGTTTGGGTATGCACTCATGATTAAAAGATGATAC
TACCAAGGTAACCGAACCCGTATAAGAGTAATTACTACTCTAGATGCTAG
TCATATTGTGTTGAATCCATGATGCTTTACATTTGATACGCTTTTTTTAC
CTATTGAAAAAGGTATTGTCTGCCGAAATAAAAGATGTGCATAAGTCAAA
ATAAAGACAAGCGTTTAACCACATATAAGAACATTACTATATTAACGGCA
TATTAATGAAGGGCAAAGCTTATGCATCCTCTTAAATTTCTAACGGGTAC
ATTATTGCTTGTGATGATACCTCAATGGCAGGTGATGCTCTATACAGCCT
ACGACAAAGCCTGAAAGATAACAACAATGTGCTGCAGAGTTGGGATCCAA
CTCTGGTTAATCCATGTACATGGTTCCATGTTACTTGTAACCCTGATAAC
AGTGTCATCAGACTGTAAGTTGATCAAAGATCTTTTTGTTTATTCTCCCT
TTGAGGTGAAAGACTGACCATTTGAATATGTACTGTCTCCCTTTTGCTAG
CGATCTTGGAAATGCACAACTATCAGGTCCATTGGTGCCACAGCTTGGGC
AATTGAAAAATATGCAATATCTGTAAGTTTCCACATCCATGATTTTGATA
ATTGAGCTAATAGTTTCATGATGCCATATAGGTGCATCTTTCACTCCCAA
TATTGGTTTAGCATAATTGCTTAGTTTTTGTGGAGCTTCTGAAACATGTG
CGCATGCTTTTGGGTGCATTATGTCTCCTTTTGTCTGACGCCCAACAGTT
CTCACTTCTCTTACTATTTCTTACCATATATATTTTCCAATAAATATTGT
ACCCTCCAATAAATATATAGGTCACCTTCGTGTTGAATTTATGTTTCATC
ATTTTGCAACAGAGAACTTTACAGTAACAACATAAGTGGGCCAATACCAC
CTGAACTGGGGAACTTAACTAACCTGGTCAGTTTGGATCTGTACCTCAAC
AACTTCACTGGAGGCATTCCTGACACCTTGGGCCAACTATCAAAGTTGCG
GTTTCTGTAAGTTAATTCAATTGCCCTGGTTACAGAAGTGATATGTTCAT
GTGGCATTGTCCATCAATATATGTTGATCCTGTTAGTATAAATTATCTGA
TTGTTATTCGGTCATGATTTATCTGACAATGATGTGAAGAAATAGAAAGT
TCTTACAGAACAGTAATATATGCATGATGTGCCCAACAATAGGTTTGCAC
AAAGTTATCCTCCAAATGCACTCTTCACTTTGTGATAGTAGATACTAAGG
TTTTCATAACATCAATCATCCACTTGTCCATTTGTGTCTTTTTCTTTTGA
TTTTTAAAATGAAAGGCAAAATCCATTGTCTAGTTCTTGCCTTGTTACTT
ATTACATTATCTCTAAGCTTATCTATTGACTATTGGAAAGATTGTAACGT
TTTTATTTCTTTGGATATCTACTTGCAAGGACAGCCGTCTTAATAACAAC
AGTCTTTCTGGCCAAATTCCGGAAACGTTGACCAATATCAACACTCTCCA
AGTTCTGTAAGTTACCTGTTGCCCTTTTAGCTGTTCAGGATGTTAGATGA
CAGCAAAAAGTGTTTTGAAAATCTTGCAGGGATCTCTCAAACAACAATCT
CTCAGGAGGGGTGCCATCAAGTGGTTCATTTTCTCTGTTTACACCTATAA
GGTAATTTCTGGATGAATTTGGATGCTTAATTGCATCTTCTGATGCAGTT
CTCCTGCCAGTTGAAAACAAAAACCTGTGTCTTCTGATGTTGACAATTCT
AACCTTTTTGTCATAGTTTTGCTAACAACCCAAATCTTTGTGGCCCTGGT
ACTACAAAGCCTTGTCCTGGGGCTCCTCCATTTTCTCCACCCCCTCCATA
CAATCCCCCATCACCAGCTTCATCAAAAGGTACGGTGATTGGCTGTACAT
TCTGTCATATCATGCTACTGTTTGAGATATGCATGAGAGTGAAGCACTGA
TATGATCAAACTATGGTACATGACATATCCTAACTGTGTTAATTCTGTTC
CCTCAGGCGTGTCCAGCACTGGAGCAATTGCTGGAGGCGTTGCGGCTGGC
ACTGCATTTCTGATTGCTGTGCCTGCTATTGGATACGCATTGTGGCGGAG
GCGAAAACCTGAAGAGCAATTCTTTGATGTCCCTGGTCGGTATTATATAC
CACTGTGCGGTTGTTGTCATCTGTGCTATTCATTTCATTTATATGCTCTC
ATTTCGATTCAGCTGAGGAGGATCCTGAAGTTCACCTTGGACAACTCAAG
AGGTTCTCACTGAGAGAGCTTCAAGTCGCCACAGATAATTTTAACAATAG
GAATGTCCTAGGAAGAGGTGGTTTTGGAAAGGTGTACAAAGGGAGACTGT
CGGATGGTTCACTGGTAGCGGTGAAGAGATTAAAGGAGGAACGCACCCCT
GGCGGAGAGCTCCAGTTCCAAACAGAAGTTGAATTGATTAGCATGGCAGT
GCACAGGAATCTGCTTCGGCTCCGTGGATTCTGCATGACTCCTACAGAGC
GGTTGCTAGTATATCCATACATGGCTAACGGGAGTGTTGCATCGCGCCTT
CGAGGTACCTGATTCTTTCTCACAGCTCAAATCTTTTCTTCTGCATTTAA
TTGGAAACAAAGTGCTATAAATTTGTGCCAAAAGCATAAAACCATTTTTA
CTTTCTTTGTTTTCTAGTCCCAGCTTAGTTTGGATAGTTCTGATTTCATT
CCTGATGCTTTGATTTTGTAGAACGCACGCCAAATGATCCCCCTCTTGAA
TGGGAAACAAGGGCCAGAATCGCACTGGGATCAGCCAGAGGTCTCTCTTA
CTTGCACGACCACTGTGATCCCAAGATCATTCACCGCGACGTGAAAGCCG
CCAACATCCTGTTGGACGAAGACTTTGAAGCCGTGGTGGGTGACTTTGGC
CTCGCCAAGCTCATGGATTACAAGGACACCCACGTGACGACTGCTGTACG
TGGGACGATCGGCCACATCGCCCCCGAGTATCTGTCCACCGGAAAGTCCT
CTGAGAAGACGGACGTCTTCGGCTACGGGATCATGCTTCTGGAACTCATC
ACTGGGCAGAGGGCGTTTGACCTCGCTCGTCTCGCGAACGATGACGACGT
CATGCTCCTTGACTGGGTAAGTAAAGTACTGTACACCATGCTCTGGCTTC
GTTAAATGCTTGAAAGTACTCACTCCATTCCAAATTATAAGACATTCTAA
GAATCTTAGAGAGTCAAAGTATCTTAAGTTTGACCAAAATTATAGAGAAA
ATTACAAAAATTTATAACATCAAATAGATATACTATGAAAATATAATCAA
TGAAGAATCTAATGATACTTAATTGGTGTCATAAATATTATTATCTTATC
ATATAAATTTGGTCAAACTTGAGAACTTGAGATTCTTTTGACTCTCCAAG
ATTCTTGGAATGCCTTATAATTTGGGATGGAGGAAGTACCTGTGACAGGA
ATGGAAAGAAATGAAGAAACTGGTGTTATTGTTGTGGTTGCACAGGTGAA
GGCGCTGCTGAAGGAGAAGAAGCTGGAGCAGCTTGTGGACCCGGACCTGC
AGGGCCGGTACGCGGACCAGGAGGTGGAGTCGCTGATCCAGGTGGCGCTG
CTGTGCACGCAGGGGTCCCCGATGGAGCGGCCCAAGATGTCGGAGGTGGT
GCGGATGCTGGAGGGCGATGGGCTGGCGGAGCGATGGGAGCAGTGGCAGA
AGGTGGAGGTGATGCGGCAGGAGGCGGAACTCGCCCCGCGCCACAACGAC
TGGATCGTCGACTCCACCTACAGCCTCAGGGCCGTCGAACTGTCTGGCCC
GAGGTAGGCGATGACTGATGCGGAGGTAGATGATCGTCGTGAAAATTCCT
TGTCTGTGAATATGACAGCAGGTAGTTTGGTGGTTGGTCCTGAATGATAG
CTGCGAAATTGTAGCTGGAATTGTGCACTCGTGTCCTCACCTGACTTCTG
TAAGTTTTGGTTTTTCTAATTAG
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gene from alignment at Sh_004L21:36145..41367-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_004L21_g000050 ID=Sh_004L21_g000050|Name=Sh_004L21_g000050|organism=R570 Sugarcane cultivar|type=gene|length=5223bp|location=Sequence derived from alignment at Sh_004L21:36145..41367- (R570 Sugarcane cultivar)
TTTCGACCCCCGAGAGGCGGGTCGGGCGCCGGAGGGATGGCGGCGTCGCT GAGGTGGTGGTGGTCGGCGGTGGTATTGTCGGTGGTGGTCGGCGTGAGCC CGGTTGTCGCCAACACGGAGGGTATGCGTACGCCACTGCTTCATGATATC TGTGGTTTATTTTCTTCATAGTTTGATGAGTAGCCCGCAGCGGAGCGAAT TTCCTTCTAGGGGGATAATGGCTGAAAATCTGGGGATGGTGTCCAGAAAT CTAGTGTTTGTTAGCGTTCTACAGGCCTCTGTTGATGGGCGGGGACTGAA CAGGGGATGAAACGATAGCCTGTAGTTCTCATTTCCAGCGCTTTGACGGA TTGCTTTGGGGGGCGCGGTGTTTGTCTCTCCTAGTGTTTTTGTCATTTTG TACTATATATACGGCAATGTTTGTATGACAGGCGTTGTTTTGTTACATCT GGAAAGGTTGGTTGCACAAACCTGGAAGGGCAATTCGTTCTGGAACAAAT GCGGTCTATGCACAGAAGTGTAGATTCTGGTTTCTACTCGTGTCACCGTC TAGAACTATTTTGGGCCTCAAGGTTCCAAAGGAACTATTTTAGGCTCTGT CGAAATTGTTGCCTTTAAGTTTTTTCTATGAAGGTGCATATGCAGGGCTT ATTTATTTATTTTTTTCTGATGCAAAACTTTGGTCTTTGATTCACTACTA CACAGTAAATTTTCATTCCATTTCACCATTGAATCTGAACTAAGATGATT GTTTTTGTTTATTTGGCTAAAGATAGAATTAGTACTCATGGAAGCTGGAG GAAAGAAATTCTGATTACTGAACCTTATCTGTTGGGTTGGGAGATGGGGA GATCACTATACTTAGTTATAATTGTCTCATTAATTTGTTCAGGCATCATA TATGGACTAATATATTAACGGTACGTTGTTAACGAACAACCTGTACTTTC TATCTAAATAAAGCGGTGTCATTTAGAATGAACTGAAGCTACATAACGAA AAAAATGAATGCGTACGTTACTTTCTTAAAACTGAGCATCCTACGGACGT GCAAACTAATTGCGAAGAATCGGAAAGCATGGCTTAATCATTAAGAGTGC ATTGTTTAGAGTGTTTTTTTTACCATTCTTCCTAGTACACATGTGGAAAG AAACCGCATTGCCTTAAATGCTAGTGATTTTTACATGGTGGCTGTATCCT TGAAATGGATAGTAACGTTTGGGTATGCACTCATGATTAAAAGATGATAC TACCAAGGTAACCGAACCCGTATAAGAGTAATTACTACTCTAGATGCTAG TCATATTGTGTTGAATCCATGATGCTTTACATTTGATACGCTTTTTTTAC CTATTGAAAAAGGTATTGTCTGCCGAAATAAAAGATGTGCATAAGTCAAA ATAAAGACAAGCGTTTAACCACATATAAGAACATTACTATATTAACGGCA TATTAATGAAGGGCAAAGCTTATGCATCCTCTTAAATTTCTAACGGGTAC ATTATTGCTTGTGATGATACCTCAATGGCAGGTGATGCTCTATACAGCCT ACGACAAAGCCTGAAAGATAACAACAATGTGCTGCAGAGTTGGGATCCAA CTCTGGTTAATCCATGTACATGGTTCCATGTTACTTGTAACCCTGATAAC AGTGTCATCAGACTGTAAGTTGATCAAAGATCTTTTTGTTTATTCTCCCT TTGAGGTGAAAGACTGACCATTTGAATATGTACTGTCTCCCTTTTGCTAG CGATCTTGGAAATGCACAACTATCAGGTCCATTGGTGCCACAGCTTGGGC AATTGAAAAATATGCAATATCTGTAAGTTTCCACATCCATGATTTTGATA ATTGAGCTAATAGTTTCATGATGCCATATAGGTGCATCTTTCACTCCCAA TATTGGTTTAGCATAATTGCTTAGTTTTTGTGGAGCTTCTGAAACATGTG CGCATGCTTTTGGGTGCATTATGTCTCCTTTTGTCTGACGCCCAACAGTT CTCACTTCTCTTACTATTTCTTACCATATATATTTTCCAATAAATATTGT ACCCTCCAATAAATATATAGGTCACCTTCGTGTTGAATTTATGTTTCATC ATTTTGCAACAGAGAACTTTACAGTAACAACATAAGTGGGCCAATACCAC CTGAACTGGGGAACTTAACTAACCTGGTCAGTTTGGATCTGTACCTCAAC AACTTCACTGGAGGCATTCCTGACACCTTGGGCCAACTATCAAAGTTGCG GTTTCTGTAAGTTAATTCAATTGCCCTGGTTACAGAAGTGATATGTTCAT GTGGCATTGTCCATCAATATATGTTGATCCTGTTAGTATAAATTATCTGA TTGTTATTCGGTCATGATTTATCTGACAATGATGTGAAGAAATAGAAAGT TCTTACAGAACAGTAATATATGCATGATGTGCCCAACAATAGGTTTGCAC AAAGTTATCCTCCAAATGCACTCTTCACTTTGTGATAGTAGATACTAAGG TTTTCATAACATCAATCATCCACTTGTCCATTTGTGTCTTTTTCTTTTGA TTTTTAAAATGAAAGGCAAAATCCATTGTCTAGTTCTTGCCTTGTTACTT ATTACATTATCTCTAAGCTTATCTATTGACTATTGGAAAGATTGTAACGT TTTTATTTCTTTGGATATCTACTTGCAAGGACAGCCGTCTTAATAACAAC AGTCTTTCTGGCCAAATTCCGGAAACGTTGACCAATATCAACACTCTCCA AGTTCTGTAAGTTACCTGTTGCCCTTTTAGCTGTTCAGGATGTTAGATGA CAGCAAAAAGTGTTTTGAAAATCTTGCAGGGATCTCTCAAACAACAATCT CTCAGGAGGGGTGCCATCAAGTGGTTCATTTTCTCTGTTTACACCTATAA GGTAATTTCTGGATGAATTTGGATGCTTAATTGCATCTTCTGATGCAGTT CTCCTGCCAGTTGAAAACAAAAACCTGTGTCTTCTGATGTTGACAATTCT AACCTTTTTGTCATAGTTTTGCTAACAACCCAAATCTTTGTGGCCCTGGT ACTACAAAGCCTTGTCCTGGGGCTCCTCCATTTTCTCCACCCCCTCCATA CAATCCCCCATCACCAGCTTCATCAAAAGGTACGGTGATTGGCTGTACAT TCTGTCATATCATGCTACTGTTTGAGATATGCATGAGAGTGAAGCACTGA TATGATCAAACTATGGTACATGACATATCCTAACTGTGTTAATTCTGTTC CCTCAGGCGTGTCCAGCACTGGAGCAATTGCTGGAGGCGTTGCGGCTGGC ACTGCATTTCTGATTGCTGTGCCTGCTATTGGATACGCATTGTGGCGGAG GCGAAAACCTGAAGAGCAATTCTTTGATGTCCCTGGTCGGTATTATATAC CACTGTGCGGTTGTTGTCATCTGTGCTATTCATTTCATTTATATGCTCTC ATTTCGATTCAGCTGAGGAGGATCCTGAAGTTCACCTTGGACAACTCAAG AGGTTCTCACTGAGAGAGCTTCAAGTCGCCACAGATAATTTTAACAATAG GAATGTCCTAGGAAGAGGTGGTTTTGGAAAGGTGTACAAAGGGAGACTGT CGGATGGTTCACTGGTAGCGGTGAAGAGATTAAAGGAGGAACGCACCCCT GGCGGAGAGCTCCAGTTCCAAACAGAAGTTGAATTGATTAGCATGGCAGT GCACAGGAATCTGCTTCGGCTCCGTGGATTCTGCATGACTCCTACAGAGC GGTTGCTAGTATATCCATACATGGCTAACGGGAGTGTTGCATCGCGCCTT CGAGGTACCTGATTCTTTCTCACAGCTCAAATCTTTTCTTCTGCATTTAA TTGGAAACAAAGTGCTATAAATTTGTGCCAAAAGCATAAAACCATTTTTA CTTTCTTTGTTTTCTAGTCCCAGCTTAGTTTGGATAGTTCTGATTTCATT CCTGATGCTTTGATTTTGTAGAACGCACGCCAAATGATCCCCCTCTTGAA TGGGAAACAAGGGCCAGAATCGCACTGGGATCAGCCAGAGGTCTCTCTTA CTTGCACGACCACTGTGATCCCAAGATCATTCACCGCGACGTGAAAGCCG CCAACATCCTGTTGGACGAAGACTTTGAAGCCGTGGTGGGTGACTTTGGC CTCGCCAAGCTCATGGATTACAAGGACACCCACGTGACGACTGCTGTACG TGGGACGATCGGCCACATCGCCCCCGAGTATCTGTCCACCGGAAAGTCCT CTGAGAAGACGGACGTCTTCGGCTACGGGATCATGCTTCTGGAACTCATC ACTGGGCAGAGGGCGTTTGACCTCGCTCGTCTCGCGAACGATGACGACGT CATGCTCCTTGACTGGGTAAGTAAAGTACTGTACACCATGCTCTGGCTTC GTTAAATGCTTGAAAGTACTCACTCCATTCCAAATTATAAGACATTCTAA GAATCTTAGAGAGTCAAAGTATCTTAAGTTTGACCAAAATTATAGAGAAA ATTACAAAAATTTATAACATCAAATAGATATACTATGAAAATATAATCAA TGAAGAATCTAATGATACTTAATTGGTGTCATAAATATTATTATCTTATC ATATAAATTTGGTCAAACTTGAGAACTTGAGATTCTTTTGACTCTCCAAG ATTCTTGGAATGCCTTATAATTTGGGATGGAGGAAGTACCTGTGACAGGA ATGGAAAGAAATGAAGAAACTGGTGTTATTGTTGTGGTTGCACAGGTGAA GGCGCTGCTGAAGGAGAAGAAGCTGGAGCAGCTTGTGGACCCGGACCTGC AGGGCCGGTACGCGGACCAGGAGGTGGAGTCGCTGATCCAGGTGGCGCTG CTGTGCACGCAGGGGTCCCCGATGGAGCGGCCCAAGATGTCGGAGGTGGT GCGGATGCTGGAGGGCGATGGGCTGGCGGAGCGATGGGAGCAGTGGCAGA AGGTGGAGGTGATGCGGCAGGAGGCGGAACTCGCCCCGCGCCACAACGAC TGGATCGTCGACTCCACCTACAGCCTCAGGGCCGTCGAACTGTCTGGCCC GAGGTAGGCGATGACTGATGCGGAGGTAGATGATCGTCGTGAAAATTCCT TGTCTGTGAATATGACAGCAGGTAGTTTGGTGGTTGGTCCTGAATGATAG CTGCGAAATTGTAGCTGGAATTGTGCACTCGTGTCCTCACCTGACTTCTG TAAGTTTTGGTTTTTCTAATTAG
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