Sh_005M20_g000060

Overview
NameSh_005M20_g000060
Unique NameSh_005M20_g000060
Typegene
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length4757
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_005M20contigSh_005M20:64503..69259
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
Notesimilar to H0818H01.3 protein
TypemRNA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
Sh_005M20_t000060Sh_005M20_t000060R570 Sugarcane cultivarmRNA


Sequences
The following sequences are available for this feature:

gene sequence

>Sh_005M20_g000060 ID=Sh_005M20_g000060|Name=Sh_005M20_g000060|organism=R570 Sugarcane cultivar|type=gene|length=4757bp
GGCGCCCGTTCGTTGCGTATTCCGCAAGTTGGTCGGCCTCCCTCCCTCCG
CCGTGGGAGGGGAAAGCGGAGGAGGTAGAGGAAGAGGAGCCAAGCGGTTA
AGCCAGCTCGGCCGCTCGCCTCCCACCCAAACCCCCCCGAAAATACTCGA
ATCCCCACCCAAGCAACATCCCGAAAAAGGCGTGAAGCGCCCGAGGTCGG
GGGCCGATGGTGGTGCGGCGGCTGGGCGGCGCGGGGCGCGCGCTGCTCAC
GCTCCCCAACATCCGGAGGCGGGCGTCCAACTCCTGGGCCGCCGTCTGCG
ATACCTTCTTCTCCACCAAGGTGACGACTGGCGACCTAGCCCCCCTCCCT
AATGCAGTGCGATCTTGCTTGATTCGCTGACGCGTGCGCGTGCGCTCTTC
CGATGGCCCGCAGCAAGTGTTCGAGAACCACCGCATCGTCTTCACAGTCG
GCACCTCCATCGCCTCCGTCCTCACGGCTTGGGCCGGTACGCTCCTCCCT
GCTCTGGCAGATGAGCTGTTGCTCTAGATTTCAGTATTGACCATGGTTTG
GTGGGTGATGTGTGAATAATCAACGGCCTGGAAGTTCAGCCTGATTCATC
AGGCTGGGTTTCCCAGTCACTTTAGGCTGTAGTTGTGGGAGGTACTGCTG
CAACCGTGCAGCTTATGTGCTGCTACAGATTTGTTACGCATAGTGATTGA
CTTTGATAGGGGTTAGGGAATGACTAGATTAGAACTGTACAGCAATGGTT
TCAGTGTCCAGTGTGTCTGGGATGGAAGCTTGGACTTTGTATCCCATTTT
CTTAGGACCATATGAGTTAGGCTTGGAAAAACATAGTTTACCTTTGGTGT
TCGATTGTTTGCTGATTCCCCAATTTAATTTGCATGAAGTGATTATTCTA
AACTCATGTTGATCAGTCCAATTATATTTTGTTAAATTTGAAGTCACATT
CACTTGGGTTTCCAACTGGTAGTTTCTCGTCATGTACAACCGTTTGGATT
AACAGAAAATAATGTGACTAATGTCCATTTTTTAATTAAGCATTTGTAAT
GTACTGAATGTTTACTTATGTTTCTTAGAATATCTTCATTGGATGGATTC
ACAATATTTACAATGTGAATTTTCTCACTATAGGCTATTCACTTCGCCAG
GTGCATCAATCAAGGATTGAAAGGAGGCTTGAGTCAATTGAATCATCTGT
AAGTAATTTAGAAGAAATACTGTTTTCTTTGGTGAAGCGAGCTGTTCTCT
CCTTTGGGCTCTGTTTATAAGCTGGTAACCCCAGCAGGTGGTGTGAGCAT
TAAGACGCTGTTGTGTAATCTCTTAGCCTCTGACAAAAAAAGGGAAAAAA
ATACGGGTTTTCTTAAAGATGCAGGAGTGTTGTGTCTTTTAGTCAAAAAG
AGATAACTGGTCTGAAAACACACACTTTCGAAACACAAACTCTCACACAA
AAGCACTGACACACAAACGCACACCCCCAGACAGACAGTAAGATCACCAC
ACAGAAGAAATACTGTCAAAGTTTTTTTAGTTACTCTTTGAACACAGAGT
TGTATCCTCTACACCTGTTTCTGTTTGGGCCATTCTCATTTCTCACTTCT
CAGCTTGACCTACATATGCAAAGCTGACAGCAAAGCAAGTTTGGACTGTT
CCACTGTAGGCTTAAAATTTCAGGGCATATGAGATTAGAAACATGTGTGT
GGTGCTATTTTGTTTCCTGAGCAACATTTTTTTTGTTGAAACAAACATGC
AGGAAAACCGCCTATTATATTACAAGGAAAATTGGTTTGGGGGACTTTTT
TTTTCTGATTTTTTGCAGTAGGATGCTGTTAATTTTCCCCTTGTCTGTAG
GACACTAGTGACAAGAAGTTTTTGCGTGTGTCCTATAGGCAGGGCACATT
TGTTCTTGTCCTGTAGACAAATTTTCCATATTAGAAAGAAAGAGCAAAAA
TGTCCTGTAGACAAATTTCCCATACTAGAAAGGAAGAGCAAAACACTGTC
TGTGAAGGGAACTACCACAGATTACAATACAACCTAGTGTTCCAACAGAA
CATACCTTGTGCTGTTGACAACAAGATTAAAGTGTTCTCTCGCTGTCCCT
TTCATCTGTATCTATTTCAATATGTTGCTTATTTTTATTTTTATGGTGCA
CTCTGACGTTGGAGATACACTCCTTAACCCAGCCAAAAAAACATGATGCT
TTAGGTTTTTATATTGTACCACGTTGCCTACAAGTTTTCGAATGGTTGGA
TCGTCTGCTTTCCTTGTCCCTTTCTATTTTCTTTTTGTTCTTTTTTCACG
TGTTGACTGCTAGACATATTTATTTATACCATTTCTTGATCTGTTACCAG
CTGAAGGGAAACCACAAAGTTGAACATGAAGAGATAAAAAAGATCGTCAC
TTCCAGCAATATTAGCGCTCCAGCCTGTGTAGCCACGGCGATGACCACAA
TGGTTGTTGGGTATGTTCTTGCTGTTGATATTCAACTTTGGTTTTCTACT
TTGCTCTTATCCACTTTGATAGTACCGCTCTTTGAATTTATGTAATTCAT
TTTATGACCTGGCATGATACTTACTTTCTAGATAAGGCTATAATGTCCTA
AGGCTTAATTTAAGCTTAAATCCATGCATATGTTCTATACTTGACATGAC
TGTGGTCCACATTGACCATCATGCATCAAATTGGTACTTGATTCATTGAT
CTATGTGGTTACTGGCTTAGGATGGGTAGATGTTGAAGGAGTACATTTAC
TACCAGGCTTGCTTTTGAGTTTTGAACCTTTTCCCACTGCTCAGAACAGC
ATCAAGTATTATGACTTGAGTGTACACACTGCCGACCATTTTGGACTTTG
GCATCATTGGGACCGGACCAGTTTGGACTTAAAGATCTTATTTTAGCTAA
GATGTTGCCATGTTATGTATATAGTGATAGTCAAACTTGAAATTCACTGG
TCTGATGTTAAATTGCACCTGCCATGCTTCAGCTTCCATTAGTGGTATGG
ATATGGAACCATTTCCCACATGTGCTGCTGGTGGCAACTTAATTTCCACC
ATCATAGTATCTTGCAACCTAAGCAGTTCCACTTTGCTCATGCATTGTCA
TTGGGGGATCTATTACAATTCCAAGCTCCAATCATCTGGTGAAAATTTAC
ACGAGTAACAAATGACAGCCTGTCTGTTTGCATCAACCTAAGTGTGTTAT
CTTGTGGAATTTCCAGGTACACGCTGGGATGGCGAGGCGGTGCTTGGTAT
GCTCGAAGGGCCTTGAGAAGAGAGCAACAAAAGATGATGATGGGTCACAT
GAAGTCACATAACAGATGGCACTGGCGGCCCTTCAACAGACTCAGAAACA
GGCTTAGGAATAGCAGGTTAGCCTCCAAGAACAAGAGCGCCGACGCCCAT
CCGTCGGTGGGTCAAAGCAGCGAGGCCCCCTCAACCTCTGCGAACGTTAG
CGGTGCTTCTCAGCCGGCAGCGGGCAGTGCATGAACTATATATGCATACT
ACATGGACTAAGATGTTGAACTTGATGGACTAGGATGCATGAACTATATA
TCCACTAGCGAGTAGTAGTGAAAAAGACATCCACTAGAGTTGGAAACTCA
GCACTAGCTAGCGATCAATCAGGCGCTGCAGTGGTCGCGAGCACTGCCGT
GCTGCCCGCCGCGGTGCCGCCCCCCACGCAGCAACCGTAGGCCGCGACAA
GCACGGCAAACAGCTGCTGACACCCCCATTTCCCACACGGAACCACCAGG
CGCCAGCCAGCGTCATGGCGGTGGCCTCGACGTCGCCCCTGTCCGCCACG
GCCCCCTCGCCGCCCGCTCCCGCATTCGGCTTCCGCGCTCTCCGCTACCG
CCTCGGCCGCGCCAGCTCTAGCCCGGCTGGTCCATCTGTCTCCGCCATAC
TAATAACCCGGCCTGCTGTGCAGGAGGAGGCTCCGCGTGGATGCGATCAG
GACGCAGCGGGAGAAGCAAGGGACGGACGGAGTCGGAGCGGACGACCCCA
TGGTTCCCTCCTCGGACGAGAGCGACTGGGTGGTCAGGCTCGAGCAGTCG
TTCAACATTTTCGCCACGGTGATTCTTCAGTAGCCCACCAGATTCCCAGC
ACAATGCGTCCTGATTTCTTCACCCCTGCAAAATCCTGTACCCATACGTC
TCCATATCTTACTAGTGTGCTATTCCTTTCCTTTTTTCGCGATCGGGCCA
TCCTTTCCGCAGGATTCGGTGATTATGGTACTCAAGGGCGTGTACCGTGA
TCGGTACTACGCCAGGTTCTTTGCCAGGCCAGGGTGCCGTATTTCGGTGA
GGGCTCCGTTTTCTCATATGCTTGCCTGAAAAAGGCTCCGTTTCTGCCGT
GCCGTTGTGGTGTGCTTTTTTTTTTTTTTTGGACTCTGCTTGGTTATGAA
CAGCGTTCATATCGGTGCTTCACATGTATTCGACCTTTGGCTGGTGGAGA
CGAGCTGATTATATAAAGGTTCACTTTGCGCAGAGCTGGAACGAGTTCCA
TCACCTCTTGATCATGGAAGTATGTCTCCATCTTCCCTTTCCAGTAAAAT
TCATGTGCGCGACATCCACCTTTCAGTGCTATTATGTCACCACGACTTAA
TTCTATTCTGTTGGTTTGCCTATTTTGTTTTCCTTATTAATTATCACTTC
AGTTTCTTTACATGAATTCAACCTACTTATGGATTCATCCCTTGGCTCAT
ATCAGGAATTGGGCGGCAACTCTTTATGGATTGACTGTTTCCTTGCTCGG
TTTATGG
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gene from alignment at Sh_005M20:64503..69259-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_005M20_g000060 ID=Sh_005M20_g000060|Name=Sh_005M20_g000060|organism=R570 Sugarcane cultivar|type=gene|length=4757bp|location=Sequence derived from alignment at Sh_005M20:64503..69259- (R570 Sugarcane cultivar)
GGCGCCCGTTCGTTGCGTATTCCGCAAGTTGGTCGGCCTCCCTCCCTCCG CCGTGGGAGGGGAAAGCGGAGGAGGTAGAGGAAGAGGAGCCAAGCGGTTA AGCCAGCTCGGCCGCTCGCCTCCCACCCAAACCCCCCCGAAAATACTCGA ATCCCCACCCAAGCAACATCCCGAAAAAGGCGTGAAGCGCCCGAGGTCGG GGGCCGATGGTGGTGCGGCGGCTGGGCGGCGCGGGGCGCGCGCTGCTCAC GCTCCCCAACATCCGGAGGCGGGCGTCCAACTCCTGGGCCGCCGTCTGCG ATACCTTCTTCTCCACCAAGGTGACGACTGGCGACCTAGCCCCCCTCCCT AATGCAGTGCGATCTTGCTTGATTCGCTGACGCGTGCGCGTGCGCTCTTC CGATGGCCCGCAGCAAGTGTTCGAGAACCACCGCATCGTCTTCACAGTCG GCACCTCCATCGCCTCCGTCCTCACGGCTTGGGCCGGTACGCTCCTCCCT GCTCTGGCAGATGAGCTGTTGCTCTAGATTTCAGTATTGACCATGGTTTG GTGGGTGATGTGTGAATAATCAACGGCCTGGAAGTTCAGCCTGATTCATC AGGCTGGGTTTCCCAGTCACTTTAGGCTGTAGTTGTGGGAGGTACTGCTG CAACCGTGCAGCTTATGTGCTGCTACAGATTTGTTACGCATAGTGATTGA CTTTGATAGGGGTTAGGGAATGACTAGATTAGAACTGTACAGCAATGGTT TCAGTGTCCAGTGTGTCTGGGATGGAAGCTTGGACTTTGTATCCCATTTT CTTAGGACCATATGAGTTAGGCTTGGAAAAACATAGTTTACCTTTGGTGT TCGATTGTTTGCTGATTCCCCAATTTAATTTGCATGAAGTGATTATTCTA AACTCATGTTGATCAGTCCAATTATATTTTGTTAAATTTGAAGTCACATT CACTTGGGTTTCCAACTGGTAGTTTCTCGTCATGTACAACCGTTTGGATT AACAGAAAATAATGTGACTAATGTCCATTTTTTAATTAAGCATTTGTAAT GTACTGAATGTTTACTTATGTTTCTTAGAATATCTTCATTGGATGGATTC ACAATATTTACAATGTGAATTTTCTCACTATAGGCTATTCACTTCGCCAG GTGCATCAATCAAGGATTGAAAGGAGGCTTGAGTCAATTGAATCATCTGT AAGTAATTTAGAAGAAATACTGTTTTCTTTGGTGAAGCGAGCTGTTCTCT CCTTTGGGCTCTGTTTATAAGCTGGTAACCCCAGCAGGTGGTGTGAGCAT TAAGACGCTGTTGTGTAATCTCTTAGCCTCTGACAAAAAAAGGGAAAAAA ATACGGGTTTTCTTAAAGATGCAGGAGTGTTGTGTCTTTTAGTCAAAAAG AGATAACTGGTCTGAAAACACACACTTTCGAAACACAAACTCTCACACAA AAGCACTGACACACAAACGCACACCCCCAGACAGACAGTAAGATCACCAC ACAGAAGAAATACTGTCAAAGTTTTTTTAGTTACTCTTTGAACACAGAGT TGTATCCTCTACACCTGTTTCTGTTTGGGCCATTCTCATTTCTCACTTCT CAGCTTGACCTACATATGCAAAGCTGACAGCAAAGCAAGTTTGGACTGTT CCACTGTAGGCTTAAAATTTCAGGGCATATGAGATTAGAAACATGTGTGT GGTGCTATTTTGTTTCCTGAGCAACATTTTTTTTGTTGAAACAAACATGC AGGAAAACCGCCTATTATATTACAAGGAAAATTGGTTTGGGGGACTTTTT TTTTCTGATTTTTTGCAGTAGGATGCTGTTAATTTTCCCCTTGTCTGTAG GACACTAGTGACAAGAAGTTTTTGCGTGTGTCCTATAGGCAGGGCACATT TGTTCTTGTCCTGTAGACAAATTTTCCATATTAGAAAGAAAGAGCAAAAA TGTCCTGTAGACAAATTTCCCATACTAGAAAGGAAGAGCAAAACACTGTC TGTGAAGGGAACTACCACAGATTACAATACAACCTAGTGTTCCAACAGAA CATACCTTGTGCTGTTGACAACAAGATTAAAGTGTTCTCTCGCTGTCCCT TTCATCTGTATCTATTTCAATATGTTGCTTATTTTTATTTTTATGGTGCA CTCTGACGTTGGAGATACACTCCTTAACCCAGCCAAAAAAACATGATGCT TTAGGTTTTTATATTGTACCACGTTGCCTACAAGTTTTCGAATGGTTGGA TCGTCTGCTTTCCTTGTCCCTTTCTATTTTCTTTTTGTTCTTTTTTCACG TGTTGACTGCTAGACATATTTATTTATACCATTTCTTGATCTGTTACCAG CTGAAGGGAAACCACAAAGTTGAACATGAAGAGATAAAAAAGATCGTCAC TTCCAGCAATATTAGCGCTCCAGCCTGTGTAGCCACGGCGATGACCACAA TGGTTGTTGGGTATGTTCTTGCTGTTGATATTCAACTTTGGTTTTCTACT TTGCTCTTATCCACTTTGATAGTACCGCTCTTTGAATTTATGTAATTCAT TTTATGACCTGGCATGATACTTACTTTCTAGATAAGGCTATAATGTCCTA AGGCTTAATTTAAGCTTAAATCCATGCATATGTTCTATACTTGACATGAC TGTGGTCCACATTGACCATCATGCATCAAATTGGTACTTGATTCATTGAT CTATGTGGTTACTGGCTTAGGATGGGTAGATGTTGAAGGAGTACATTTAC TACCAGGCTTGCTTTTGAGTTTTGAACCTTTTCCCACTGCTCAGAACAGC ATCAAGTATTATGACTTGAGTGTACACACTGCCGACCATTTTGGACTTTG GCATCATTGGGACCGGACCAGTTTGGACTTAAAGATCTTATTTTAGCTAA GATGTTGCCATGTTATGTATATAGTGATAGTCAAACTTGAAATTCACTGG TCTGATGTTAAATTGCACCTGCCATGCTTCAGCTTCCATTAGTGGTATGG ATATGGAACCATTTCCCACATGTGCTGCTGGTGGCAACTTAATTTCCACC ATCATAGTATCTTGCAACCTAAGCAGTTCCACTTTGCTCATGCATTGTCA TTGGGGGATCTATTACAATTCCAAGCTCCAATCATCTGGTGAAAATTTAC ACGAGTAACAAATGACAGCCTGTCTGTTTGCATCAACCTAAGTGTGTTAT CTTGTGGAATTTCCAGGTACACGCTGGGATGGCGAGGCGGTGCTTGGTAT GCTCGAAGGGCCTTGAGAAGAGAGCAACAAAAGATGATGATGGGTCACAT GAAGTCACATAACAGATGGCACTGGCGGCCCTTCAACAGACTCAGAAACA GGCTTAGGAATAGCAGGTTAGCCTCCAAGAACAAGAGCGCCGACGCCCAT CCGTCGGTGGGTCAAAGCAGCGAGGCCCCCTCAACCTCTGCGAACGTTAG CGGTGCTTCTCAGCCGGCAGCGGGCAGTGCATGAACTATATATGCATACT ACATGGACTAAGATGTTGAACTTGATGGACTAGGATGCATGAACTATATA TCCACTAGCGAGTAGTAGTGAAAAAGACATCCACTAGAGTTGGAAACTCA GCACTAGCTAGCGATCAATCAGGCGCTGCAGTGGTCGCGAGCACTGCCGT GCTGCCCGCCGCGGTGCCGCCCCCCACGCAGCAACCGTAGGCCGCGACAA GCACGGCAAACAGCTGCTGACACCCCCATTTCCCACACGGAACCACCAGG CGCCAGCCAGCGTCATGGCGGTGGCCTCGACGTCGCCCCTGTCCGCCACG GCCCCCTCGCCGCCCGCTCCCGCATTCGGCTTCCGCGCTCTCCGCTACCG CCTCGGCCGCGCCAGCTCTAGCCCGGCTGGTCCATCTGTCTCCGCCATAC TAATAACCCGGCCTGCTGTGCAGGAGGAGGCTCCGCGTGGATGCGATCAG GACGCAGCGGGAGAAGCAAGGGACGGACGGAGTCGGAGCGGACGACCCCA TGGTTCCCTCCTCGGACGAGAGCGACTGGGTGGTCAGGCTCGAGCAGTCG TTCAACATTTTCGCCACGGTGATTCTTCAGTAGCCCACCAGATTCCCAGC ACAATGCGTCCTGATTTCTTCACCCCTGCAAAATCCTGTACCCATACGTC TCCATATCTTACTAGTGTGCTATTCCTTTCCTTTTTTCGCGATCGGGCCA TCCTTTCCGCAGGATTCGGTGATTATGGTACTCAAGGGCGTGTACCGTGA TCGGTACTACGCCAGGTTCTTTGCCAGGCCAGGGTGCCGTATTTCGGTGA GGGCTCCGTTTTCTCATATGCTTGCCTGAAAAAGGCTCCGTTTCTGCCGT GCCGTTGTGGTGTGCTTTTTTTTTTTTTTTGGACTCTGCTTGGTTATGAA CAGCGTTCATATCGGTGCTTCACATGTATTCGACCTTTGGCTGGTGGAGA CGAGCTGATTATATAAAGGTTCACTTTGCGCAGAGCTGGAACGAGTTCCA TCACCTCTTGATCATGGAAGTATGTCTCCATCTTCCCTTTCCAGTAAAAT TCATGTGCGCGACATCCACCTTTCAGTGCTATTATGTCACCACGACTTAA TTCTATTCTGTTGGTTTGCCTATTTTGTTTTCCTTATTAATTATCACTTC AGTTTCTTTACATGAATTCAACCTACTTATGGATTCATCCCTTGGCTCAT ATCAGGAATTGGGCGGCAACTCTTTATGGATTGACTGTTTCCTTGCTCGG TTTATGG
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