Sh_006L22_contig-1_g000080

Overview
NameSh_006L22_contig-1_g000080
Unique NameSh_006L22_contig-1_g000080
Typegene
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length3397
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_006L22_contig-1contigSh_006L22_contig-1:34474..37870
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteHomeobox-leucine zipper protein HOX32
TypemRNA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
Sh_006L22_contig-1_t000080Sh_006L22_contig-1_t000080R570 Sugarcane cultivarmRNA


Sequences
The following sequences are available for this feature:

gene sequence

>Sh_006L22_contig-1_g000080 ID=Sh_006L22_contig-1_g000080|Name=Sh_006L22_contig-1_g000080|organism=R570 Sugarcane cultivar|type=gene|length=3397bp
CCTCTCTCCCCCATCCCCGTCTCGCCGCTAGCTTTCCCTTTCCCTTGCGC
TCCTCCCCTCCTCACCCTCCCGGTCGGCTCGCCAAGCAAGCAACAACCAC
CCCCCACCACCACCGCCACTCCTCTCAGTCTCTCACCACCATGGCGTCGG
GCGGCTGCGCTCTCGCCCCGAGGCTATGACTTGGCGCCGCCCGTGGCCGT
GGCTCTCCGTCTTCTTCCGACAATCCCTCCTCCTCCTCCTCCTCCTCCTC
CTGCTCCTCCTCCTTGGGCGGCGGTGCTAGCTACCTAGATGGCGATGGTG
GTGGTCGGGGGCGGCAAGGACCGGTCCTCGCCTGGCGGCGGTGGGGCGCC
GCAGGTGGACACAGGCAAGTACGTGCGCTACACCCCCGAGCAGGTGGAGG
CGCTCGAGCGGGTCTACAGCGAGTGCCCCAAGCCCAGCTCGCTGCGCAGG
CAGCAGCTCATCAGGGAGTGCCCCATACTCAGCAACATCGAGCCCAAGCA
GATCAAGGTCTGGTTCCAGAACCGCAGGTGCGTGCGTCGCCGGAACCACC
AGCCCTTCTCTCCATCCATCGTCTCATCTCTGTTCGTGCCTCCTGCTACT
GAAATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGTTGTTGTC
GTCTTGGGTTAAATTATTATTAATGGAACGAGCTTCCTTGTTAGCCGCAT
ATTCTTAGGATGTTTGCCTTCATGTAAGTAAGCCATCGAAATCGTCTTGA
GTACAAAGAGAAGAGGCGCGAAATGGTTTTGGTAATAAGTTCTGGTTAGT
TTTCAAGGATGTTACGTTCTGCCTCTTGCATTGGACTGGCTGCCAGCACA
CAACACAAGGCCCTCCCTTGGTCTGCTTTTGTTTGGAGTCATCAGTTCCT
ATGATATGATTTTTGAGTTCTGAGGTCGGTCCATATTTTCTCAGTTTTCA
GCTGGAACTTGAACATCGAGTACTGCGCTGTAGGACTGCAAATTCTCTTT
GCTGACCCCCCCCCCCCCGTTTGTCTCGCGGTTAGGCGTAATGGATGCGT
CTTCTGCTGCTCGCATGTGCTGCTATTGTTTTCTCCGCACGTAGCAACAA
ACTTTGCTTAGGGTGTGATTACTGCGCGAAAAGTAGCTGAAAAGTTACTG
TAGCATCTTTCGTGGTTATTTGGTAAAATTTGTCTAATTATGGACTAGCT
AGGCTCAAAAGATTCATCCCGACATTTACAGACAAACTATACAATTAGTT
ATCTTTTTTACCTACATTTAATGCTCCATGCATGCGTCGAAAGATTTGAT
GTGATGGATGAAAGAGGAAATATTTTTGGATTGGGATGGGGAAGTAAACA
AGGCCTTAGCATTTGTAAGAAGAAGCTGCTGTCCCTGTATTTGGATAAAT
AAATGGATCTAATTAGATACCCCGTGCCTATCACAACGTTCACGTTAAGA
GCAGATTTGAAGGGTAGTGGGGAAACAAAACGTCATTTTCAGTTGGGCAA
CCAATTAACTCGCCTGAGTTTGTGTGAGCCATTGCTTGCTTTACTGCCAC
ACGGTCTTGTAGCTGGAATACGATGTTTAGAATGAGCAATTACATTTGAA
TACTGCGAGCCAGGAATCGCTGTCTTGGTTTCTTAAGCTGTGCGCGTGAG
ATTATCAGCCAAATTAGCCAGCCAACAGTTTTTTTCTCTTAAAAAAACCA
GTCAGCACACTTTCAGCCAGCCAGATCAACCCAAACGAACTCCTGTGCGA
TGTGACTACGATTCTGATGATTCTTGCGGTTGATTGGTAGGTGCCGCGAG
AAGCAGCGGAAGGAGGCCTCGCGCCTGCAGACTGTGAACCGGAAGCTGAC
TGCGATGAACAAGCTGTTGATGGAGGAGAATGACAGGCTGCAGAAGCAGG
TCTCCCGACTCGTCTACGAGAATGGGTACATGCGACAGCAGCTCCATAAT
GTGAGATCCGTCTCCTTTGCCCATTCCCCAGAACATCTTGCTCGTGTTTT
TCTAGATAAATCAGCTGAATGCTACTAAGTATCATGTAAAAGTGAATGTG
CTGTTTTATGTAACTTTTGATGTGCACCTTGTTGCATGCTTCCACGTCTA
ATACTGTGTGTTATGATGTTTGCAGCCTTCTGCTGCGACCACAGACACGA
GCTGTGAGTCTGTGGTCACAAGTGGTCAGCACCACCAACAGCAAAACCCA
GCAGCTCCGCGTCCTCAACGGGACGCGAATAACCCAGCTGGGTAATTTCA
GTCCCCAACATTTCTTAGACCGCTTTTGTGCTTGCATGCTTGTAAATCTG
ATGGCGTTCTTTTTCGTTATGGCAGTCTACTAGCTATTGCTGAGGAGACC
TTGGCAGAGTTCCTGTCGAAAGCGACAGGAACTGCTGTCGATTGGGTGCA
AATGGTTGGGATGAAGGTAATATAATTGTTGCGACAAAAAGAAAGAATTG
TGCCATGTGTTGCCTACTTCAATTCTGTTTTGGCTAATTACTTAAATCAT
GAATTCCTTTACAGCCTGGTCCGGATTCCATTGGAATCATCGCTGTTTCG
CACAATTGTAGTGGCGTAGCAGCCCGAGCTTGCGGCCTAGTGAGCCTTGA
GCCCACAAAGGTGTGTTTTTTTTTGTTCATTCTTCATCATCACATAGCTT
TATGTTTCTGTTCAGCAGACATGCCCTAACTGACTAGTCCATAGGTCGCG
GAGATCCTCAAGGATCGCCCTTCTTGGTACCGCGACTGCCGGTGCGTGGA
TATCCTCCATGTTATCCCTACGGGTAACGGTGGAACTATCGAGCTTATCT
ACATGCAGGTAAGCATCGTCATACAAGTTATAGTGCTTTCTGCATTCTTG
AATCATTGTCCTCCATGTTGCCTGTTAACATGACTGTTACTTTCATCACA
TTCTTTAGACTTACGCACCGACAACTCTGGCGGCACCACGCGACTTTTGG
ACTCTCCGATACACTAGTGGTCTTGAGGATGGCAGTCTTGTGGTAATGCT
TCTTTTTTTTTGTTACTATGATGTTATCATTTATGTTAGTCTTGTCAATT
CTATTTGCTTATTCTGTTTGGATCAGACAACTTATGTTAGGTGCTACTTG
ATTGCCCTCTCAGGATATCTATTGTGCTCACAGTTGGTAACTGTTGTTTC
TTGTCTTGTTTTGTAGATCTGTGAGAGATCATTGACACAATCGACTGGAC
ACTACTACAAAACATAGATATTGTAACATATTCTTGTAACGCATTCGTCA
AAGTGTTCCAAAGAAATTGTATAGTAACACAAAACAATGTGTTACAGACT
AGGTTTGTAACACAATGCGTTTGTTTTATAAAAATGTGTTACTAACAGTG
ATTACAGTAACACAAAATTAATGTTCCCAGTAAAATGTTACAAAAGT
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gene from alignment at Sh_006L22_contig-1:34474..37870-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_006L22_contig-1_g000080 ID=Sh_006L22_contig-1_g000080|Name=Sh_006L22_contig-1_g000080|organism=R570 Sugarcane cultivar|type=gene|length=3397bp|location=Sequence derived from alignment at Sh_006L22_contig-1:34474..37870- (R570 Sugarcane cultivar)
CCTCTCTCCCCCATCCCCGTCTCGCCGCTAGCTTTCCCTTTCCCTTGCGC TCCTCCCCTCCTCACCCTCCCGGTCGGCTCGCCAAGCAAGCAACAACCAC CCCCCACCACCACCGCCACTCCTCTCAGTCTCTCACCACCATGGCGTCGG GCGGCTGCGCTCTCGCCCCGAGGCTATGACTTGGCGCCGCCCGTGGCCGT GGCTCTCCGTCTTCTTCCGACAATCCCTCCTCCTCCTCCTCCTCCTCCTC CTGCTCCTCCTCCTTGGGCGGCGGTGCTAGCTACCTAGATGGCGATGGTG GTGGTCGGGGGCGGCAAGGACCGGTCCTCGCCTGGCGGCGGTGGGGCGCC GCAGGTGGACACAGGCAAGTACGTGCGCTACACCCCCGAGCAGGTGGAGG CGCTCGAGCGGGTCTACAGCGAGTGCCCCAAGCCCAGCTCGCTGCGCAGG CAGCAGCTCATCAGGGAGTGCCCCATACTCAGCAACATCGAGCCCAAGCA GATCAAGGTCTGGTTCCAGAACCGCAGGTGCGTGCGTCGCCGGAACCACC AGCCCTTCTCTCCATCCATCGTCTCATCTCTGTTCGTGCCTCCTGCTACT GAAATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGTTGTTGTC GTCTTGGGTTAAATTATTATTAATGGAACGAGCTTCCTTGTTAGCCGCAT ATTCTTAGGATGTTTGCCTTCATGTAAGTAAGCCATCGAAATCGTCTTGA GTACAAAGAGAAGAGGCGCGAAATGGTTTTGGTAATAAGTTCTGGTTAGT TTTCAAGGATGTTACGTTCTGCCTCTTGCATTGGACTGGCTGCCAGCACA CAACACAAGGCCCTCCCTTGGTCTGCTTTTGTTTGGAGTCATCAGTTCCT ATGATATGATTTTTGAGTTCTGAGGTCGGTCCATATTTTCTCAGTTTTCA GCTGGAACTTGAACATCGAGTACTGCGCTGTAGGACTGCAAATTCTCTTT GCTGACCCCCCCCCCCCCGTTTGTCTCGCGGTTAGGCGTAATGGATGCGT CTTCTGCTGCTCGCATGTGCTGCTATTGTTTTCTCCGCACGTAGCAACAA ACTTTGCTTAGGGTGTGATTACTGCGCGAAAAGTAGCTGAAAAGTTACTG TAGCATCTTTCGTGGTTATTTGGTAAAATTTGTCTAATTATGGACTAGCT AGGCTCAAAAGATTCATCCCGACATTTACAGACAAACTATACAATTAGTT ATCTTTTTTACCTACATTTAATGCTCCATGCATGCGTCGAAAGATTTGAT GTGATGGATGAAAGAGGAAATATTTTTGGATTGGGATGGGGAAGTAAACA AGGCCTTAGCATTTGTAAGAAGAAGCTGCTGTCCCTGTATTTGGATAAAT AAATGGATCTAATTAGATACCCCGTGCCTATCACAACGTTCACGTTAAGA GCAGATTTGAAGGGTAGTGGGGAAACAAAACGTCATTTTCAGTTGGGCAA CCAATTAACTCGCCTGAGTTTGTGTGAGCCATTGCTTGCTTTACTGCCAC ACGGTCTTGTAGCTGGAATACGATGTTTAGAATGAGCAATTACATTTGAA TACTGCGAGCCAGGAATCGCTGTCTTGGTTTCTTAAGCTGTGCGCGTGAG ATTATCAGCCAAATTAGCCAGCCAACAGTTTTTTTCTCTTAAAAAAACCA GTCAGCACACTTTCAGCCAGCCAGATCAACCCAAACGAACTCCTGTGCGA TGTGACTACGATTCTGATGATTCTTGCGGTTGATTGGTAGGTGCCGCGAG AAGCAGCGGAAGGAGGCCTCGCGCCTGCAGACTGTGAACCGGAAGCTGAC TGCGATGAACAAGCTGTTGATGGAGGAGAATGACAGGCTGCAGAAGCAGG TCTCCCGACTCGTCTACGAGAATGGGTACATGCGACAGCAGCTCCATAAT GTGAGATCCGTCTCCTTTGCCCATTCCCCAGAACATCTTGCTCGTGTTTT TCTAGATAAATCAGCTGAATGCTACTAAGTATCATGTAAAAGTGAATGTG CTGTTTTATGTAACTTTTGATGTGCACCTTGTTGCATGCTTCCACGTCTA ATACTGTGTGTTATGATGTTTGCAGCCTTCTGCTGCGACCACAGACACGA GCTGTGAGTCTGTGGTCACAAGTGGTCAGCACCACCAACAGCAAAACCCA GCAGCTCCGCGTCCTCAACGGGACGCGAATAACCCAGCTGGGTAATTTCA GTCCCCAACATTTCTTAGACCGCTTTTGTGCTTGCATGCTTGTAAATCTG ATGGCGTTCTTTTTCGTTATGGCAGTCTACTAGCTATTGCTGAGGAGACC TTGGCAGAGTTCCTGTCGAAAGCGACAGGAACTGCTGTCGATTGGGTGCA AATGGTTGGGATGAAGGTAATATAATTGTTGCGACAAAAAGAAAGAATTG TGCCATGTGTTGCCTACTTCAATTCTGTTTTGGCTAATTACTTAAATCAT GAATTCCTTTACAGCCTGGTCCGGATTCCATTGGAATCATCGCTGTTTCG CACAATTGTAGTGGCGTAGCAGCCCGAGCTTGCGGCCTAGTGAGCCTTGA GCCCACAAAGGTGTGTTTTTTTTTGTTCATTCTTCATCATCACATAGCTT TATGTTTCTGTTCAGCAGACATGCCCTAACTGACTAGTCCATAGGTCGCG GAGATCCTCAAGGATCGCCCTTCTTGGTACCGCGACTGCCGGTGCGTGGA TATCCTCCATGTTATCCCTACGGGTAACGGTGGAACTATCGAGCTTATCT ACATGCAGGTAAGCATCGTCATACAAGTTATAGTGCTTTCTGCATTCTTG AATCATTGTCCTCCATGTTGCCTGTTAACATGACTGTTACTTTCATCACA TTCTTTAGACTTACGCACCGACAACTCTGGCGGCACCACGCGACTTTTGG ACTCTCCGATACACTAGTGGTCTTGAGGATGGCAGTCTTGTGGTAATGCT TCTTTTTTTTTGTTACTATGATGTTATCATTTATGTTAGTCTTGTCAATT CTATTTGCTTATTCTGTTTGGATCAGACAACTTATGTTAGGTGCTACTTG ATTGCCCTCTCAGGATATCTATTGTGCTCACAGTTGGTAACTGTTGTTTC TTGTCTTGTTTTGTAGATCTGTGAGAGATCATTGACACAATCGACTGGAC ACTACTACAAAACATAGATATTGTAACATATTCTTGTAACGCATTCGTCA AAGTGTTCCAAAGAAATTGTATAGTAACACAAAACAATGTGTTACAGACT AGGTTTGTAACACAATGCGTTTGTTTTATAAAAATGTGTTACTAACAGTG ATTACAGTAACACAAAATTAATGTTCCCAGTAAAATGTTACAAAAGT
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