Sh_008F07_t000060

Overview
NameSh_008F07_t000060
Unique NameSh_008F07_t000060
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length732
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_008F07contigSh_008F07:55603..56334
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
Notesimilar to Resistance protein T10rga2-1A
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_008F07_g000060Sh_008F07_g000060R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_008F07_p000060Sh_008F07_p000060R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_008F07_t000060 ID=Sh_008F07_t000060|Name=Sh_008F07_t000060|organism=R570 Sugarcane cultivar|type=mRNA|length=732bp
ATGGATGGAGTTCTTGGCTATGCTGAATCCGCTGTTGCGGAGGAGGTTGC
CTTGCAGCTTGGCATCCAGCAAGACCAAGCTTTCATTAGGGATGAGCTTG
AGATGATGATGGCTTTCCTGATGGCAGCACATGAGGAGCGGGATGAGCAC
AAGGCGATCAAGACTTGGGTGAAGCAGGTCCGTGACGTAGCCTATGACGC
GGAGGACTCCCTCCAGGATTTTGCTGTACGTCTGGGGAAGCCATCCTGGT
GGCGCATCCCTCTCTTGCTGCTTGAACGCCGCCGTGCGGCCAAGAATATG
AAGGATCTCCGAGCGAAGGTTGAGGCTGTCAGCCAGAGGAATGCGCGCTA
CCACCTCATCAAGGGCCCTGGCTCCAAGGCTATCACCACATCTGGACAGT
ACAATTTGGCCCGGGAAACAATGTCTAGCACTGAGGAAGCAAGGAGGCAG
CATGAAAATGCAAAGCTCAATCTCATTCAATTGATCAACAAGAAAGACAA
AAACCTCAGGGTGATCTCTGTGTGGGGAACAAGTGGTGTTCCTGGGGAGA
CATCTATCATAAAAATGGCCTATGATGATCTTGAGAGAAAGAAGAAGTTT
GAGTGCCATGCATGGATCAGGATCATGCATCCTTTCAATCAAACAGAGTT
TGTGCAGAATATCGTCCAACAATTCTATGTTAATTCCCTAGAGGAAACAA
CAAAGACATCGGAGAATATGGATGATGAGTGA
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protein sequence of Sh_008F07_p000060

>Sh_008F07_p000060 ID=Sh_008F07_p000060|Name=Sh_008F07_p000060|organism=R570 Sugarcane cultivar|type=polypeptide|length=244bp
MDGVLGYAESAVAEEVALQLGIQQDQAFIRDELEMMMAFLMAAHEERDEH
KAIKTWVKQVRDVAYDAEDSLQDFAVRLGKPSWWRIPLLLLERRRAAKNM
KDLRAKVEAVSQRNARYHLIKGPGSKAITTSGQYNLARETMSSTEEARRQ
HENAKLNLIQLINKKDKNLRVISVWGTSGVPGETSIIKMAYDDLERKKKF
ECHAWIRIMHPFNQTEFVQNIVQQFYVNSLEETTKTSENMDDE*
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mRNA from alignment at Sh_008F07:55603..56334-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_008F07_t000060 ID=Sh_008F07_t000060|Name=Sh_008F07_t000060|organism=R570 Sugarcane cultivar|type=mRNA|length=732bp|location=Sequence derived from alignment at Sh_008F07:55603..56334- (R570 Sugarcane cultivar)
ATGGATGGAGTTCTTGGCTATGCTGAATCCGCTGTTGCGGAGGAGGTTGC CTTGCAGCTTGGCATCCAGCAAGACCAAGCTTTCATTAGGGATGAGCTTG AGATGATGATGGCTTTCCTGATGGCAGCACATGAGGAGCGGGATGAGCAC AAGGCGATCAAGACTTGGGTGAAGCAGGTCCGTGACGTAGCCTATGACGC GGAGGACTCCCTCCAGGATTTTGCTGTACGTCTGGGGAAGCCATCCTGGT GGCGCATCCCTCTCTTGCTGCTTGAACGCCGCCGTGCGGCCAAGAATATG AAGGATCTCCGAGCGAAGGTTGAGGCTGTCAGCCAGAGGAATGCGCGCTA CCACCTCATCAAGGGCCCTGGCTCCAAGGCTATCACCACATCTGGACAGT ACAATTTGGCCCGGGAAACAATGTCTAGCACTGAGGAAGCAAGGAGGCAG CATGAAAATGCAAAGCTCAATCTCATTCAATTGATCAACAAGAAAGACAA AAACCTCAGGGTGATCTCTGTGTGGGGAACAAGTGGTGTTCCTGGGGAGA CATCTATCATAAAAATGGCCTATGATGATCTTGAGAGAAAGAAGAAGTTT GAGTGCCATGCATGGATCAGGATCATGCATCCTTTCAATCAAACAGAGTT TGTGCAGAATATCGTCCAACAATTCTATGTTAATTCCCTAGAGGAAACAA CAAAGACATCGGAGAATATGGATGATGAGTGA
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Coding sequence (CDS) from alignment at Sh_008F07:55603..56334-

>Sh_008F07_t000060 ID=Sh_008F07_t000060|Name=Sh_008F07_t000060|organism=R570 Sugarcane cultivar|type=CDS|length=732bp|location=Sequence derived from alignment at Sh_008F07:55603..56334- (R570 Sugarcane cultivar)
ATGGATGGAGTTCTTGGCTATGCTGAATCCGCTGTTGCGGAGGAGGTTGC
CTTGCAGCTTGGCATCCAGCAAGACCAAGCTTTCATTAGGGATGAGCTTG
AGATGATGATGGCTTTCCTGATGGCAGCACATGAGGAGCGGGATGAGCAC
AAGGCGATCAAGACTTGGGTGAAGCAGGTCCGTGACGTAGCCTATGACGC
GGAGGACTCCCTCCAGGATTTTGCTGTACGTCTGGGGAAGCCATCCTGGT
GGCGCATCCCTCTCTTGCTGCTTGAACGCCGCCGTGCGGCCAAGAATATG
AAGGATCTCCGAGCGAAGGTTGAGGCTGTCAGCCAGAGGAATGCGCGCTA
CCACCTCATCAAGGGCCCTGGCTCCAAGGCTATCACCACATCTGGACAGT
ACAATTTGGCCCGGGAAACAATGTCTAGCACTGAGGAAGCAAGGAGGCAG
CATGAAAATGCAAAGCTCAATCTCATTCAATTGATCAACAAGAAAGACAA
AAACCTCAGGGTGATCTCTGTGTGGGGAACAAGTGGTGTTCCTGGGGAGA
CATCTATCATAAAAATGGCCTATGATGATCTTGAGAGAAAGAAGAAGTTT
GAGTGCCATGCATGGATCAGGATCATGCATCCTTTCAATCAAACAGAGTT
TGTGCAGAATATCGTCCAACAATTCTATGTTAATTCCCTAGAGGAAACAA
CAAAGACATCGGAGAATATGGATGATGAGTGA
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