Sh_008F07_t000090

Overview
NameSh_008F07_t000090
Unique NameSh_008F07_t000090
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length273
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_008F07contigSh_008F07:74443..74947
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteConserved hypothetical protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_008F07_g000090Sh_008F07_g000090R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_008F07_p000090Sh_008F07_p000090R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_008F07_t000090 ID=Sh_008F07_t000090|Name=Sh_008F07_t000090|organism=R570 Sugarcane cultivar|type=mRNA|length=273bp
ATGCTGACATGTTTTGCAGAAGGACCTAATCCATTTAAGGGTGATCTGTT
TGTAATTCTTGGTTCAATGCTTTATGCTTGCAGTAATGTTACTGAGGAGT
TTGTTATCAAGAAAAGTAACAGAGTGGAGTTGATGGCAATGTTGGGACTT
TTTGGAGCAATTGTCAGTGGCATACAAATGTATCCTTTGGAATTTACCCA
TTTTATTATTTTTTCAACCATATCCTATACTCTCCTCCTGTCCGAGGAAA
TTTCTTTATTATTGTTTCCTTGA
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protein sequence of Sh_008F07_p000090

>Sh_008F07_p000090 ID=Sh_008F07_p000090|Name=Sh_008F07_p000090|organism=R570 Sugarcane cultivar|type=polypeptide|length=91bp
MLTCFAEGPNPFKGDLFVILGSMLYACSNVTEEFVIKKSNRVELMAMLGL
FGAIVSGIQMYPLEFTHFIIFSTISYTLLLSEEISLLLFP*
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mRNA from alignment at Sh_008F07:74443..74947-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_008F07_t000090 ID=Sh_008F07_t000090|Name=Sh_008F07_t000090|organism=R570 Sugarcane cultivar|type=mRNA|length=505bp|location=Sequence derived from alignment at Sh_008F07:74443..74947- (R570 Sugarcane cultivar)
GCAAGATCCATAAAGTACTTTCATGGTCATAGGAAAATTGTTCTATTTTT TTAGCATTGCTGAACATGGCATGTTTCCTTTTTCCCTTACATGCTGACAT GTTTTGCAGAAGGACCTAATCCATTTAAGGGTGATCTGTTTGTAATTCTT GGTTCAATGCTTTATGCTTGCAGTAATGTTACTGAGGTAACCAGCGACTT CTTTGGCATTATTTGCATGTTACACAACTATTCATATGATCAGTTGTTTC TCGTTGGTTGTAAGTGTACAAAGAGATTTAGCAATTCTTCTCACTGAAAT TCAGGAGTTTGTTATCAAGAAAAGTAACAGAGTGGAGTTGATGGCAATGT TGGGACTTTTTGGAGCAATTGTCAGTGGCATACAAATGTATCCTTTGGAA TTTACCCATTTTATTATTTTTTCAACCATATCCTATACTCTCCTCCTGTC CGAGGAAATTTCTTTATTATTGTTTCCTTGACATTGCAACAGTAGTATAC TCGAG
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Coding sequence (CDS) from alignment at Sh_008F07:74443..74947-

>Sh_008F07_t000090 ID=Sh_008F07_t000090|Name=Sh_008F07_t000090|organism=R570 Sugarcane cultivar|type=CDS|length=273bp|location=Sequence derived from alignment at Sh_008F07:74443..74947- (R570 Sugarcane cultivar)
ATGCTGACATGTTTTGCAGAAGGACCTAATCCATTTAAGGGTGATCTGTT
TGTAATTCTTGGTTCAATGCTTTATGCTTGCAGTAATGTTACTGAGGAGT
TTGTTATCAAGAAAAGTAACAGAGTGGAGTTGATGGCAATGTTGGGACTT
TTTGGAGCAATTGTCAGTGGCATACAAATGTATCCTTTGGAATTTACCCA
TTTTATTATTTTTTCAACCATATCCTATACTCTCCTCCTGTCCGAGGAAA
TTTCTTTATTATTGTTTCCTTGA
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