Sh_008G08_p000060

Overview
NameSh_008G08_p000060
Unique NameSh_008G08_p000060
Typepolypeptide
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length1145
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_008G08contigSh_008G08:59575..63940
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Cross References
External references for this polypeptide
DatabaseAccession
InterProIPR013324
InterProIPR002885
InterProIPR000943
InterProIPR011991
InterProIPR014284
InterProIPR013325
InterProIPR007630
InterProIPR007627
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
Sh_008G08_t000060Sh_008G08_t000060R570 Sugarcane cultivarmRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Sh_008G08_p000060 ID=Sh_008G08_p000060|Name=Sh_008G08_p000060|organism=R570 Sugarcane cultivar|type=polypeptide|length=1145bp
MSRGVKPVHRTCLQLERIIVGRHRSGSLGLEDALNLFDELLPQARPASVH
AFNRVLTVVACGDSSSSQRHGAALAVSLFNTMARVGVNKLAADACTFSIL
MRCFCTVGRLDFALGAFGQFLKTGWRVQVMALNQLIKGLCDGKMTSEAMD
IVLRRMPELGCTPYVFSYTILIKGLCDGKRTRDAMDIVLRRMPELGCTPN
VFSYNTLIKGLCAEKKSQQALELLLRMTADGGYNCPPNVVSYSMVIDGFF
KEGEVDKAYTLFHEMLGRGFPPDLVTYNSVIDGLCKAQAVEKAEAVLQQM
FDKGVMPDSWSYNSLIHRYCSLGQLEEAVRLLKKMSGGGLQPNVIGRCTE
ARNIFDSMVRRGQKPDAATYRTLLHGYATKGALVDMHDLLDLMIRDGIPL
EHRAFNILICAYAKHETVDKAMAAFIEMRHKGLRPDVVSYTMVIDILCKT
GRVEDAVFHFNQMASEGLSPDIISFNSLIHGLCTIGEWKKVEELAIEMIN
RGIHPNARFLNTIMDSLCKEGRVVEAQDFFDLVIRTGVKPNVVSYNILID
GYCLDGKMDESIKLLDRMVSIGLRPDSVTYSALLNGYCKNGRVDDALALY
REMFSKDVKPDAITYNIMLHGLFHAGRIVAAREFYMKIVDSGTQLGIDTY
NIVLGGLCENSCVDEALRMFQSLRSKEFQLEIWTFNIMIDGLLKVGRIDK
AKGLFSAILPSGLVPDAITYSLMMQSHIEEGLLEESDELFLSMEKNGCAA
DSRMLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAALLISIVSER
KYQKEVGAERKLLDNAVDRTSVQYDSWMDEETSFWMDRNHTNSNLQYRLL
MQNLQELETNLAGKDLKMLENDICVRIEQLGALRSFTASMTRVSVKVNPP
RLRKSRKASSSQFISEWKSHPRRRRSIVREQSALLETIKERASLEKMREK
MVKEGQEVSYHRLQAGYCCRERLVVTTEWLVRYIARTHIGMGTALDDLLQ
TGKMGVLDGAEKFDSRKGCRFYTYVKYWTRKGMLALLAENSGVTLLPVIP
DEAASPEAPNEATLFWGQLRERLLLVLGRLPAREGQVLRLRHRLEDGRCR
SLEEIGGIYRVSKEWIRKIKKPAMEKLRDDEDVRRDLHDFVCHF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0016987sigma factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
GO:0006355regulation of transcription, DNA-templated