Sh_009H11_t000060

Overview
NameSh_009H11_t000060
Unique NameSh_009H11_t000060
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length1440
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_009H11contigSh_009H11:56926..58670
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NotePutative glycosyltransferase 2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_009H11_g000060Sh_009H11_g000060R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_009H11_p000060Sh_009H11_p000060R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_009H11_t000060 ID=Sh_009H11_t000060|Name=Sh_009H11_t000060|organism=R570 Sugarcane cultivar|type=mRNA|length=1440bp
ATGGGGCAGGAGGGGATGGGGTACAACAGCAAGGGAGGAGGAGGAGGCGG
CGGCGGCGGCGGAGGGCTGCCGATGACGGCGCCGCGGCCGCGGGGCGCAT
CGCCGCTCCACCACCACAGCCGGTCGCGCAAGATCCGCCGCACTTTCAAC
AACCTCAAGATCACCGTGCTCTGCGGCCTCGTCACCATCCTCGTCCTCCG
GGGCACCATCGGCCTCAACCTCTCCCTCCCCTCGCAACCCTCCGACGCCG
ACGCGCTCGCCGACGCCAAGGCCGTCGAGGACATCGACCGCATCCTCCGC
GAGATCCGCTCCGACTCCGGCCCCGACCCCGACGACGGGGGCGACTTCAG
CGCCTCCTCCGGGTTCAACGCCACCGCGCTCAGCGCCACCGAGGCCGCCG
CGGCGTACGCGGCCGCGGTCGGCAAATACGCGCTCGGCCCCAAGATCTCC
GACTGGGACGCGCAGCGGCGACGGTGGCTAGCACAGAACCCGGGCTTCCC
GGCCACCGTTGCCGGGGGCAAGCCCAGGATTATGCTCGTCACTGGCTCGC
AGCCGGGGCCCTGCGACAACCCGCTCGGCGACCACTACCTGCTCAAGACT
ACCAAGAACAAGATCGATTACTGCCGTCTCCATGGCATCGAGATTGTCCA
CAACCTCGCGCACCTTGACAACGAGCTCGCGGGATACTGGGCCAAATTGC
CGCTGCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTCGAGTGGATCTGG
TGGATGGACAGCGACGCGCTCTTCACCGACATGGCGTTCGAGCTGCCCCT
GGCGCGCTACGACGGCCACAACCTCATCATCCACGGCTACCAGGACCTCC
TCTTCGAGAAGCACTCCTGGATTGCTCTCAACACCGGCAGCTTCCTCTTC
AGGAACTGCCAGTGGTCGCTTGACCTCCTGGACGCGTGGGCGCCCATGGG
CCCCAAGGGCTTCATCCGCGACCAGGCCGGCAAGGTACTCACGGCGAACC
TCAAGGGCCGGCCAGCATTCGAGGCCGATGACCAGTCGGCACTGATTTAC
CTCTTGCTTTCGCAAAAGGACAAGTGGATGGACAAGGTGTTCATTGAGAA
TTCTTACTACTTGCATGGCTTCTGGGCTGGGCTGGTGGACAAGTATGAGG
AGATGATGGAGAATCACCACCCAGGCCTCGGTGACGAGCGGTGGCCTTTT
GTGACTCACTTTGTTGGGTGCAAGCCATGTGGGAGCTATGGGGATTACCC
AGTGGAGCGCTGCCTCAGGAGCATGGAGCGAGCGTTTAATTTTGCCGACA
ACCAGGTGCTTCGGCTATATGGTTTCTCACACAAGGGGCTGGAAAGCCCC
AAGATCAAGAGAACCAGGGATCAGACAACCAGACCGATTAATGATGTGGA
GAACTTAGATATGAAGGCTAAAATATCCACAATTTCCTGA
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protein sequence of Sh_009H11_p000060

>Sh_009H11_p000060 ID=Sh_009H11_p000060|Name=Sh_009H11_p000060|organism=R570 Sugarcane cultivar|type=polypeptide|length=480bp
MGQEGMGYNSKGGGGGGGGGGGLPMTAPRPRGASPLHHHSRSRKIRRTFN
NLKITVLCGLVTILVLRGTIGLNLSLPSQPSDADALADAKAVEDIDRILR
EIRSDSGPDPDDGGDFSASSGFNATALSATEAAAAYAAAVGKYALGPKIS
DWDAQRRRWLAQNPGFPATVAGGKPRIMLVTGSQPGPCDNPLGDHYLLKT
TKNKIDYCRLHGIEIVHNLAHLDNELAGYWAKLPLLRRLMLSHPEVEWIW
WMDSDALFTDMAFELPLARYDGHNLIIHGYQDLLFEKHSWIALNTGSFLF
RNCQWSLDLLDAWAPMGPKGFIRDQAGKVLTANLKGRPAFEADDQSALIY
LLLSQKDKWMDKVFIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPF
VTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLRLYGFSHKGLESP
KIKRTRDQTTRPINDVENLDMKAKISTIS*
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mRNA from alignment at Sh_009H11:56926..58670-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_009H11_t000060 ID=Sh_009H11_t000060|Name=Sh_009H11_t000060|organism=R570 Sugarcane cultivar|type=mRNA|length=1745bp|location=Sequence derived from alignment at Sh_009H11:56926..58670- (R570 Sugarcane cultivar)
ATGGGGCAGGAGGGGATGGGGTACAACAGCAAGGGAGGAGGAGGAGGCGG CGGCGGCGGCGGAGGGCTGCCGATGACGGCGCCGCGGCCGCGGGGCGCAT CGCCGCTCCACCACCACAGCCGGTCGCGCAAGATCCGCCGCACTTTCAAC AACCTCAAGATCACCGTGCTCTGCGGCCTCGTCACCATCCTCGTCCTCCG GGGCACCATCGGCCTCAACCTCTCCCTCCCCTCGCAACCCTCCGACGCCG ACGCGCTCGCCGACGCCAAGGCCGTCGAGGACATCGACCGCATCCTCCGC GAGATCCGCTCCGACTCCGGCCCCGACCCCGACGACGGGGGCGACTTCAG CGCCTCCTCCGGGTTCAACGCCACCGCGCTCAGCGCCACCGAGGCCGCCG CGGCGTACGCGGCCGCGGTCGGCAAATACGCGCTCGGCCCCAAGATCTCC GACTGGGACGCGCAGCGGCGACGGTGGCTAGCACAGAACCCGGGCTTCCC GGCCACCGTTGCCGGGGGCAAGCCCAGGATTATGCTCGTCACTGGCTCGC AGCCGGGGCCCTGCGACAACCCGCTCGGCGACCACTACCTGCTCAAGACT ACCAAGAACAAGATCGATTACTGCCGTCTCCATGGCATCGAGATTGTCCA CAACCTCGCGCACCTTGACAACGAGCTCGCGGGATACTGGGCCAAATTGC CGCTGCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTCGAGTGGATCTGG TGGATGGACAGCGACGCGCTCTTCACCGACATGGCGTTCGAGCTGCCCCT GGCGCGCTACGACGGCCACAACCTCATCATCCACGGCTACCAGGACCTCC TCTTCGAGAAGCACTCCTGGATTGCTCTCAACACCGGCAGCTTCCTCTTC AGGAACTGCCAGTGGTCGCTTGACCTCCTGGACGCGTGGGCGCCCATGGG CCCCAAGGGCTTCATCCGCGACCAGGCCGGCAAGGTACTCACGGCGAACC TCAAGGGCCGGCCAGCATTCGAGGCCGATGACCAGTCGGCACTGATTTAC CTCTTGCTTTCGCAAAAGGACAAGTGGATGGACAAGGTGTTCATTGAGAA TTCTTACTACTTGCATGGCTTCTGGGCTGGGCTGGTGGACAAGTATGAGG AGATGATGGAGAATCACCACCCAGGCCTCGGTGACGAGCGGTGGCCTTTT GTGACTCACTTTGTTGGGTGCAAGCCATGTGGGAGCTATGGGGATTACCC AGTGGAGCGCTGCCTCAGGAGCATGGAGCGAGCGTTTAATTTTGCCGACA ACCAGGTGCTTCGGCTATATGGTTTCTCACACAAGGGGCTGGAAAGCCCC AAGATCAAGAGAACCAGGGATCAGACAACCAGACCGATTAATGATGTGGA GAACTTAGATATGAAGGCTAAAATATCCACAATTTCCTGAAAGTTCAGAT GAGAGTTGGTGGCTTGGCAATTGCATACCTGCTTTGGCTATCAACAAGGT CAGAGCATTTTGTGATATGGGGGATATGGTTGTTCTAGTTTCCACTCTCT TGCTCTCTCTTTCCTTTTTGTTCACCAATCGTTATTGTTATGTGACAGCT AGATATTGCAAGCTTTGTTTGTTATGGAGTTAAACACGATAGGAGCTCAA ATCTGATGGAAATAGTCTTGCTTTTGTACTCTATGCCATGTCATTTTTTG TGCTAGGTTCTTGCGGAACATGCATCACTGATATGTGGAGTTTGT
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Coding sequence (CDS) from alignment at Sh_009H11:56926..58670-

>Sh_009H11_t000060 ID=Sh_009H11_t000060|Name=Sh_009H11_t000060|organism=R570 Sugarcane cultivar|type=CDS|length=1440bp|location=Sequence derived from alignment at Sh_009H11:56926..58670- (R570 Sugarcane cultivar)
ATGGGGCAGGAGGGGATGGGGTACAACAGCAAGGGAGGAGGAGGAGGCGG
CGGCGGCGGCGGAGGGCTGCCGATGACGGCGCCGCGGCCGCGGGGCGCAT
CGCCGCTCCACCACCACAGCCGGTCGCGCAAGATCCGCCGCACTTTCAAC
AACCTCAAGATCACCGTGCTCTGCGGCCTCGTCACCATCCTCGTCCTCCG
GGGCACCATCGGCCTCAACCTCTCCCTCCCCTCGCAACCCTCCGACGCCG
ACGCGCTCGCCGACGCCAAGGCCGTCGAGGACATCGACCGCATCCTCCGC
GAGATCCGCTCCGACTCCGGCCCCGACCCCGACGACGGGGGCGACTTCAG
CGCCTCCTCCGGGTTCAACGCCACCGCGCTCAGCGCCACCGAGGCCGCCG
CGGCGTACGCGGCCGCGGTCGGCAAATACGCGCTCGGCCCCAAGATCTCC
GACTGGGACGCGCAGCGGCGACGGTGGCTAGCACAGAACCCGGGCTTCCC
GGCCACCGTTGCCGGGGGCAAGCCCAGGATTATGCTCGTCACTGGCTCGC
AGCCGGGGCCCTGCGACAACCCGCTCGGCGACCACTACCTGCTCAAGACT
ACCAAGAACAAGATCGATTACTGCCGTCTCCATGGCATCGAGATTGTCCA
CAACCTCGCGCACCTTGACAACGAGCTCGCGGGATACTGGGCCAAATTGC
CGCTGCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTCGAGTGGATCTGG
TGGATGGACAGCGACGCGCTCTTCACCGACATGGCGTTCGAGCTGCCCCT
GGCGCGCTACGACGGCCACAACCTCATCATCCACGGCTACCAGGACCTCC
TCTTCGAGAAGCACTCCTGGATTGCTCTCAACACCGGCAGCTTCCTCTTC
AGGAACTGCCAGTGGTCGCTTGACCTCCTGGACGCGTGGGCGCCCATGGG
CCCCAAGGGCTTCATCCGCGACCAGGCCGGCAAGGTACTCACGGCGAACC
TCAAGGGCCGGCCAGCATTCGAGGCCGATGACCAGTCGGCACTGATTTAC
CTCTTGCTTTCGCAAAAGGACAAGTGGATGGACAAGGTGTTCATTGAGAA
TTCTTACTACTTGCATGGCTTCTGGGCTGGGCTGGTGGACAAGTATGAGG
AGATGATGGAGAATCACCACCCAGGCCTCGGTGACGAGCGGTGGCCTTTT
GTGACTCACTTTGTTGGGTGCAAGCCATGTGGGAGCTATGGGGATTACCC
AGTGGAGCGCTGCCTCAGGAGCATGGAGCGAGCGTTTAATTTTGCCGACA
ACCAGGTGCTTCGGCTATATGGTTTCTCACACAAGGGGCTGGAAAGCCCC
AAGATCAAGAGAACCAGGGATCAGACAACCAGACCGATTAATGATGTGGA
GAACTTAGATATGAAGGCTAAAATATCCACAATTTCCTGA
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