Sh_009J10_t000010

Overview
NameSh_009J10_t000010
Unique NameSh_009J10_t000010
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length1242
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_009J10contigSh_009J10:462..2645
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NotePlant cysteine oxidase 2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_009J10_g000010Sh_009J10_g000010R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_009J10_p000010Sh_009J10_p000010R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_009J10_t000010 ID=Sh_009J10_t000010|Name=Sh_009J10_t000010|organism=R570 Sugarcane cultivar|type=mRNA|length=1242bp
ATGAAGACGACGGTGGAAGGGAGCGGCGGCGCCCCGGCCGCGGTCAAGAG
GCGGCGGAGGGATGCACCTGGCAGGCGCCGGAGCGGCAGCGTGAGCGTGC
GGCGGCGCGTGCAGGTGGACGCGACGACCGCGCCAGCGCCGCTCCAGAGG
CTGCTCGCCGCGTGCCGCCGCGCGTTCGGAGGCCCCGGGACCGTGCCGTC
GCCCGACGACGTCGCCCTCATCAGGGACATCCTCGGTAAGTACGCCGCCC
CGCCCCGCCCCGCCCTGCCCTCATCATTAGCCATCGCATTGCATGATGCT
CGGTGTATATGTTTAACTAATTACTGTCTTGTGTGCTACTGTAGTGTAAT
TGTCAGTAGCGGTACTCTCTGGCACTTCAAGCTAAAAGTTGTGCAATTTA
AAAGCTGTGAAATCTCTGATCTGTCATCTGTGTATGCGAGATGTGTAAAC
CCTATCAGCCTACACGCTACTAGTAATCTTGTTCTTACTCGAAAGGAACA
TCGATCTTATCGACGCCCTCGTCATCAGCCTTCAATTCGGCTGGCCTACA
AGATGGGAGCAGAAGATGTGCACCTGAGAGTCGTCACCAAGGCCGCCGCG
GCTTCCTTCCCTCGAACACATCCTACTCCTATCATCACACGAACCACCAT
TTACAAATGCAAAAACTTCTCGATCGTCATCTTCTTGCTGCCCCCAGGCG
CGGTGATCCCTCTGCACGACCACCCCGGGATGACGGTGTTCAGCAAGCTT
CTCCTCGGCTCGCTGCACGTCACGTCGTACGACTGGGTGGACGCAGAAGA
CGGCCCGCCCACCGCCGTCGGTGGCGGCGGCGATCGCCTACTGAGGCTGG
CGAAGCGGGTGGTGGACGCCGACCTGAGCGCGCCGTGCGATGCCCTGGTG
CTGTTCCCGGAGTCCGGCGGGAACATGCACCGGTTCGCCGCCGCCACGGC
GTGCGCGGTCCTCGACGTCCTCGGCCCGCCCTACTCCGGGGACCGGGACT
GCACCTACTACCAGGACTTGCCATACCGCCATCATCATCACGACGACGAT
GCAGGTAATGAGGCCGCTGGGGACGGCGACGTCGTCCCTGCTGCCACGGA
TGATGAGCAGAAGCCACGTCTGGGGTGGCTGCTGGAGACGCGCAAGCCCA
AGGAGCTGCACATGTACGAGGTGCCGTATAGGGGCCCTCCGATCCTGTGG
AAGAAGCGGCCTACAGTTGACTCTTGGCAGCAGGGACCATGA
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protein sequence of Sh_009J10_p000010

>Sh_009J10_p000010 ID=Sh_009J10_p000010|Name=Sh_009J10_p000010|organism=R570 Sugarcane cultivar|type=polypeptide|length=414bp
MKTTVEGSGGAPAAVKRRRRDAPGRRRSGSVSVRRRVQVDATTAPAPLQR
LLAACRRAFGGPGTVPSPDDVALIRDILGKYAAPPRPALPSSLAIALHDA
RCICLTNYCLVCYCSVIVSSGTLWHFKLKVVQFKSCEISDLSSVYARCVN
PISLHATSNLVLTRKEHRSYRRPRHQPSIRLAYKMGAEDVHLRVVTKAAA
ASFPRTHPTPIITRTTIYKCKNFSIVIFLLPPGAVIPLHDHPGMTVFSKL
LLGSLHVTSYDWVDAEDGPPTAVGGGGDRLLRLAKRVVDADLSAPCDALV
LFPESGGNMHRFAAATACAVLDVLGPPYSGDRDCTYYQDLPYRHHHHDDD
AGNEAAGDGDVVPAATDDEQKPRLGWLLETRKPKELHMYEVPYRGPPILW
KKRPTVDSWQQGP*
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mRNA from alignment at Sh_009J10:462..2645+

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_009J10_t000010 ID=Sh_009J10_t000010|Name=Sh_009J10_t000010|organism=R570 Sugarcane cultivar|type=mRNA|length=2184bp|location=Sequence derived from alignment at Sh_009J10:462..2645+ (R570 Sugarcane cultivar)
ATGAAGACGACGGTGGAAGGGAGCGGCGGCGCCCCGGCCGCGGTCAAGAG GCGGCGGAGGGATGCACCTGGCAGGCGCCGGAGCGGCAGCGTGAGCGTGC GGCGGCGCGTGCAGGTGGACGCGACGACCGCGCCAGCGCCGCTCCAGAGG CTGCTCGCCGCGTGCCGCCGCGCGTTCGGAGGCCCCGGGACCGTGCCGTC GCCCGACGACGTCGCCCTCATCAGGGACATCCTCGGTAAGTACGCCGCCC CGCCCCGCCCCGCCCTGCCCTCATCATTAGCCATCGCATTGCATGATGCT CGGTGTATATGTTTAACTAATTACTGTCTTGTGTGCTACTGTAGTGTAAT TGTCAGTAGCGGTACTCTCTGGCACTTCAAGCTAAAAGTTGTGCAATTTA AAAGCTGTGAAATCTCTGATCTGTCATCTGTGTATGCGAGATGTGTAAAC CCTATCAGCCTACACGCTACTAGTAATCTTGTTCTTACTCGAAAGGAACA TCGATCTTATCGACGCCCTCGTCATCAGCCTTCAATTCGGCTGGCCTGTA TTGTATTGTGCATTTCGATCGGGCTTCTATATGGGCTCTTTTGGAAGCAA GGGACCAAAACTCAGGGACAAAAAACCTTCCACTAAGAACTATAATGACA ATTAGAATCATATCCTCATGAATTACCCACCTAGGCAGTGGCGGATCTAC CACGGGGGCTGCCGGGGGCCAAGGCCCCCCTACAACCGGCAAGCCCATGG AGCCCCCCTAAGCCCCTTCTAAAATTTTTCATCATTGTTGTGCCTTAAGA AGGAGAGGTTGCATGCGTGAGATGTGTCTAGAGGTTGAAGAAAGAGCTCT GGTCACGACTTGGACCAGCCACCTGTATGTTCAGCCCCCGCCACTGCACC CAGGCAAAAGTCTGGGATCCCAGAGAGACGGGAGTTTCCAAATTAGGCCT ATAGGAGTATCAAATTATCAACCAATGAGTCTGCCTTGTTCAGTTTGCTA ATCATCATGCATGTCCTTTCTTTTGCAGACAAGATGGGAGCAGAAGATGT GCACCTGAGAGTCGTCACCAAGGCCGCCGCGGCTTCCTTCCCTCGAACAC ATCCTACTCCTATCATCACACGAACCACCATTTACAAATGCAAAAACTTC TCGGTACGGGATACGATGATCCAGCTGAACTGAAATGCATGCGTTAACTT CATGAGCCTATTAAACACGAGTGTTTCTTGGCCATCATGCTTGTGATATC TGCATGCAGATCGTCATCTTCTTGCTGCCCCCAGGCGCGGTGATCCCTCT GCACGACCACCCCGGGATGACGGTGTTCAGCAAGCTTCTCCTCGGCTCGC TGCACGTCACGTCGTACGACTGGGTGGACGCAGAAGACGGCCCGCCCACC GCCGTCGGTGGCGGCGGCGATCGCCGTAAGTTTAATTTCTTCTGTCTACC AGGCCGTCTGATGCATATGCATATGGTCGACAAATTGGTTGTGCTGTGTA TATACTGACTGCCTAGCTACTGGCTGCATATGCCCGTAGTACTGAGGCTG GCGAAGCGGGTGGTGGACGCCGACCTGAGCGCGCCGTGCGATGCCCTGGT GCTGTTCCCGGAGTCCGGCGGGAACATGCACCGGTTCGCCGCCGCCACGG CGTGCGCGGTCCTCGACGTCCTCGGCCCGCCCTACTCCGGGGACCGGGAC TGCACCTACTACCAGGACTTGCCATACCGCCATCATCATCACGACGACGA TGCAGGTAGTAAATATAATGCAACTACTTCCTGCTGCTGCTGCTCCTACC TGATATCATCACAAACATCATCAATCTGAACTATAGAGATCTGATCCGTA ACACTAACATATATATATATATATATATATATATATATATATATATATAT ATATATATATATATATATATATATATATATATATATATATATATATATAT ATAACCTCGGTTATTTATATAATTATATGTATGCATCTTTCGCGCGCAGA TGAGGCCGCTGGGGACGGCGACGTCGTCCCTGCTGCCACGGATGATGAGC AGAAGCCACGTCTGGGGTGGCTGCTGGAGACGCGCAAGCCCAAGGAGCTG CACATGTACGAGGTGCCGTATAGGGGCCCTCCGATCCTGTGGAAGAAGCG GCCTACAGTTGACTCTTGGCAGCAGGGACCATGA
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Coding sequence (CDS) from alignment at Sh_009J10:462..2645+

>Sh_009J10_t000010 ID=Sh_009J10_t000010|Name=Sh_009J10_t000010|organism=R570 Sugarcane cultivar|type=CDS|length=1242bp|location=Sequence derived from alignment at Sh_009J10:462..2645+ (R570 Sugarcane cultivar)
ATGAAGACGACGGTGGAAGGGAGCGGCGGCGCCCCGGCCGCGGTCAAGAG
GCGGCGGAGGGATGCACCTGGCAGGCGCCGGAGCGGCAGCGTGAGCGTGC
GGCGGCGCGTGCAGGTGGACGCGACGACCGCGCCAGCGCCGCTCCAGAGG
CTGCTCGCCGCGTGCCGCCGCGCGTTCGGAGGCCCCGGGACCGTGCCGTC
GCCCGACGACGTCGCCCTCATCAGGGACATCCTCGGTAAGTACGCCGCCC
CGCCCCGCCCCGCCCTGCCCTCATCATTAGCCATCGCATTGCATGATGCT
CGGTGTATATGTTTAACTAATTACTGTCTTGTGTGCTACTGTAGTGTAAT
TGTCAGTAGCGGTACTCTCTGGCACTTCAAGCTAAAAGTTGTGCAATTTA
AAAGCTGTGAAATCTCTGATCTGTCATCTGTGTATGCGAGATGTGTAAAC
CCTATCAGCCTACACGCTACTAGTAATCTTGTTCTTACTCGAAAGGAACA
TCGATCTTATCGACGCCCTCGTCATCAGCCTTCAATTCGGCTGGCCTACA
AGATGGGAGCAGAAGATGTGCACCTGAGAGTCGTCACCAAGGCCGCCGCG
GCTTCCTTCCCTCGAACACATCCTACTCCTATCATCACACGAACCACCAT
TTACAAATGCAAAAACTTCTCGATCGTCATCTTCTTGCTGCCCCCAGGCG
CGGTGATCCCTCTGCACGACCACCCCGGGATGACGGTGTTCAGCAAGCTT
CTCCTCGGCTCGCTGCACGTCACGTCGTACGACTGGGTGGACGCAGAAGA
CGGCCCGCCCACCGCCGTCGGTGGCGGCGGCGATCGCCTACTGAGGCTGG
CGAAGCGGGTGGTGGACGCCGACCTGAGCGCGCCGTGCGATGCCCTGGTG
CTGTTCCCGGAGTCCGGCGGGAACATGCACCGGTTCGCCGCCGCCACGGC
GTGCGCGGTCCTCGACGTCCTCGGCCCGCCCTACTCCGGGGACCGGGACT
GCACCTACTACCAGGACTTGCCATACCGCCATCATCATCACGACGACGAT
GCAGGTAATGAGGCCGCTGGGGACGGCGACGTCGTCCCTGCTGCCACGGA
TGATGAGCAGAAGCCACGTCTGGGGTGGCTGCTGGAGACGCGCAAGCCCA
AGGAGCTGCACATGTACGAGGTGCCGTATAGGGGCCCTCCGATCCTGTGG
AAGAAGCGGCCTACAGTTGACTCTTGGCAGCAGGGACCATGA
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