Sh_009J10_t000030

Overview
NameSh_009J10_t000030
Unique NameSh_009J10_t000030
TypemRNA
OrganismR570 Sugarcane cultivar (R570 (sugarcane cultivar))
Sequence length150
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sh_009J10contigSh_009J10:34897..35511
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Structural and functional annotation of S. officinarum2017-07-25
Properties
Property NameValue
NoteDoubtful hypothetical protein
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Sh_009J10_g000030Sh_009J10_g000030R570 Sugarcane cultivargene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Sh_009J10_p000030Sh_009J10_p000030R570 Sugarcane cultivarpolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>Sh_009J10_t000030 ID=Sh_009J10_t000030|Name=Sh_009J10_t000030|organism=R570 Sugarcane cultivar|type=mRNA|length=150bp
ATGATTCCAGAAAGCCGAAGGAACCAGGCAGCGAAAGATGAGGTGATCGG
CAGTCTCTGCCGCATTACCACAGAGTTGGCAAATGTCGTCGTCGAGGACA
TGCTTGAGGTGGAGGTTGTAACGGCACTGTATGCGGTTGTTTACCAATAA
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protein sequence of Sh_009J10_p000030

>Sh_009J10_p000030 ID=Sh_009J10_p000030|Name=Sh_009J10_p000030|organism=R570 Sugarcane cultivar|type=polypeptide|length=50bp
MIPESRRNQAAKDEVIGSLCRITTELANVVVEDMLEVEVVTALYAVVYQ*
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mRNA from alignment at Sh_009J10:34897..35511+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Sh_009J10_t000030 ID=Sh_009J10_t000030|Name=Sh_009J10_t000030|organism=R570 Sugarcane cultivar|type=mRNA|length=615bp|location=Sequence derived from alignment at Sh_009J10:34897..35511+ (R570 Sugarcane cultivar)
TTTTTTTTAGAAGACTTCACCGGAGGGGGGAGAGCCCCACCTGAATGATT TTTCATAGATTCCGGCAAGCCGGTAAATGGAGGGTGCCAGGCACCTAGAG TTTACATGGTCTTAATCGTACAGGGCATTAATTCGTGACAAATAAATTAC ACCAGTGATCAACAATGGAACGGTCTTGGGAACGAAGGCGGCTGCTCCAT AGGCGACATGTTTCCCTGCAGCTGTACAGGAGGCGGCTCAGACAGGGTTG CTGATGGCGAAAGACGACGTCGTGGCGATGGTTCCAAATCTGCCAGCAAC ACAGTAGTATCATCATCGGGAAGTGCTTAGCCGGGATATGTGGTGGCCGT GGCATCTCCCATAGGTGAGTTGGCTCCGGAAGGTTGACCCCAGTCCAGCC AATATGATTCCAGAAAGCCGAAGGAACCAGGCAGCGAAAGATGAGGTGAT CGGCAGTCTCTGCCGCATTACCACAGAGTTGGCAAATGTCGTCGTCGAGG ACATGCTTGAGGTGGAGGTTGTAACGGCACTGTATGCGGTTGTTTACCAA TAACCAGCCGAAAAAACGTACCCTGGGGGGCGCTCGGTTTCTCCAAACGA AGCTAGAGAAATTGC
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Coding sequence (CDS) from alignment at Sh_009J10:34897..35511+

>Sh_009J10_t000030 ID=Sh_009J10_t000030|Name=Sh_009J10_t000030|organism=R570 Sugarcane cultivar|type=CDS|length=150bp|location=Sequence derived from alignment at Sh_009J10:34897..35511+ (R570 Sugarcane cultivar)
ATGATTCCAGAAAGCCGAAGGAACCAGGCAGCGAAAGATGAGGTGATCGG
CAGTCTCTGCCGCATTACCACAGAGTTGGCAAATGTCGTCGTCGAGGACA
TGCTTGAGGTGGAGGTTGTAACGGCACTGTATGCGGTTGTTTACCAATAA
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